Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
RPL39P62891 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RPL39P62891 RN7SKP44-201ENST00000363602 316 ntBASIC2.29□□□□□ -2.04
RPL39P62891 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 GSTA12P-201ENST00000402398 508 ntBASIC2.29□□□□□ -2.04
RPL39P62891 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.29□□□□□ -2.04
RPL39P62891 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.29□□□□□ -2.04
RPL39P62891 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.29□□□□□ -2.04
RPL39P62891 AL049830.2-201ENST00000480072 201 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.29□□□□□ -2.04
RPL39P62891 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.29□□□□□ -2.04
RPL39P62891 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.29□□□□□ -2.04
RPL39P62891 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.29□□□□□ -2.04
RPL39P62891 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 PARP1P2-201ENST00000556806 195 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.29□□□□□ -2.04
RPL39P62891 MIR5685-201ENST00000579080 79 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 AC015802.5-201ENST00000607478 399 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AL391497.1-201ENST00000608671 547 ntBASIC2.29□□□□□ -2.04
RPL39P62891 AC090912.3-201ENST00000609775 533 ntBASIC2.29□□□□□ -2.04
RPL39P62891 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.29□□□□□ -2.04
RPL39P62891 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPL39P62891 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
RPL39P62891 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RPL39P62891 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.28□□□□□ -2.04
RPL39P62891 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
RPL39P62891 RNA5SP229-201ENST00000410809 99 ntBASIC2.28□□□□□ -2.04
RPL39P62891 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.28□□□□□ -2.04
RPL39P62891 AL035423.1-201ENST00000420331 213 ntBASIC2.28□□□□□ -2.04
RPL39P62891 RPL7P53-201ENST00000421245 739 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.28□□□□□ -2.04
RPL39P62891 AL158073.1-201ENST00000426848 1104 ntBASIC2.28□□□□□ -2.04
RPL39P62891 BRWD1P3-201ENST00000428816 390 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AC016712.1-201ENST00000431088 378 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AC244505.4-201ENST00000434905 287 ntBASIC2.28□□□□□ -2.04
RPL39P62891 SSXP5-201ENST00000443473 287 ntBASIC2.28□□□□□ -2.04
RPL39P62891 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPL39P62891 TPT1P13-201ENST00000449760 499 ntBASIC2.28□□□□□ -2.04
RPL39P62891 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.28□□□□□ -2.04
RPL39P62891 AC025518.1-201ENST00000479856 347 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AC026979.1-201ENST00000492525 396 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.28□□□□□ -2.04
RPL39P62891 FCF1P8-201ENST00000510322 597 ntBASIC2.28□□□□□ -2.04
RPL39P62891 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPL39P62891 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPL39P62891 APOOP4-201ENST00000513530 597 ntBASIC2.28□□□□□ -2.04
RPL39P62891 RN7SKP122-201ENST00000515923 296 ntBASIC2.28□□□□□ -2.04
RPL39P62891 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPL39P62891 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.28□□□□□ -2.04
RPL39P62891 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.28□□□□□ -2.04
RPL39P62891 HSPE1P5-201ENST00000561489 272 ntBASIC2.28□□□□□ -2.04
RPL39P62891 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.28□□□□□ -2.04
RPL39P62891 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.28□□□□□ -2.04
RPL39P62891 AC020914.6-201ENST00000594327 272 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.28□□□□□ -2.04
RPL39P62891 MIR6820-201ENST00000611508 62 ntBASIC2.28□□□□□ -2.04
RPL39P62891 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.28□□□□□ -2.04
RPL39P62891 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RPL39P62891 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.28□□□□□ -2.04
RPL39P62891 MIR6758-201ENST00000620653 63 ntBASIC2.28□□□□□ -2.04
RPL39P62891 AP006248.2-201ENST00000623309 592 ntBASIC2.28□□□□□ -2.04
RPL39P62891 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.28□□□□□ -2.04
RPL39P62891 AC008264.2-201ENST00000610193 3731 ntBASIC2.28□□□□□ -2.05
RPL39P62891 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RPL39P62891 EIF3EP2-201ENST00000423042 1814 ntBASIC2.27□□□□□ -2.05
RPL39P62891 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPL39P62891 AC126755.2-208ENST00000327792 462 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC138969.1-213ENST00000331436 462 ntBASIC2.27□□□□□ -2.05
RPL39P62891 RPL32P3-201ENST00000359025 275 ntBASIC2.27□□□□□ -2.05
RPL39P62891 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPL39P62891 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.27□□□□□ -2.05
RPL39P62891 PPIAP31-201ENST00000405422 495 ntBASIC2.27□□□□□ -2.05
RPL39P62891 TCEA1P4-201ENST00000415066 844 ntBASIC2.27□□□□□ -2.05
RPL39P62891 CRYBB2P1-203ENST00000415709 538 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 SDCBPP3-201ENST00000419629 891 ntBASIC2.27□□□□□ -2.05
RPL39P62891 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 AC012498.1-201ENST00000424037 437 ntBASIC2.27□□□□□ -2.05
RPL39P62891 AL035458.1-201ENST00000433096 585 ntBASIC2.27□□□□□ -2.05
RPL39P62891 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RPL39P62891 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.27□□□□□ -2.05
RPL39P62891 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.27□□□□□ -2.05
RPL39P62891 SNORD105B-201ENST00000458770 79 ntBASIC2.27□□□□□ -2.05
RPL39P62891 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPL39P62891 RN7SL132P-201ENST00000478131 296 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms