Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RPL23AP33-201ENST00000442301 452 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AC012181.1-201ENST00000479895 423 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3S2P59780 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3S2P59780 AL132838.2-201ENST00000492041 314 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AC008953.1-201ENST00000497334 318 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.23□□□□□ -1.89
AP3S2P59780 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3S2P59780 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3S2P59780 SNORD116-30-201ENST00000516468 85 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 RN7SKP244-201ENST00000516513 307 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 SEC11B-201ENST00000518383 499 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
AP3S2P59780 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3S2P59780 TRAV8-5-201ENST00000537369 341 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AL163153.1-201ENST00000554223 283 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3S2P59780 AC006960.3-201ENST00000561845 705 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3S2P59780 MIR4646-201ENST00000580775 63 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AL354760.1-201ENST00000608357 643 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 MIR6768-201ENST00000610734 72 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AL450489.1-201ENST00000612071 468 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 AL732372.2-225ENST00000642124 456 ntBASIC3.23□□□□□ -1.89
AP3S2P59780 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
AP3S2P59780 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3S2P59780 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3S2P59780 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3S2P59780 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
AP3S2P59780 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
AP3S2P59780 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
AP3S2P59780 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3S2P59780 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
AP3S2P59780 RNA5SP235-201ENST00000365411 114 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 SKINT1L-201ENST00000401057 817 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AL590290.1-201ENST00000405336 380 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 HNRNPDP2-201ENST00000406475 478 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AL691447.1-201ENST00000419456 387 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.22□□□□□ -1.89
AP3S2P59780 BTF3P10-201ENST00000433415 495 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 RPL36AP15-201ENST00000444514 266 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3S2P59780 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3S2P59780 AL157827.1-201ENST00000447622 132 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 RPS3AP41-201ENST00000462701 778 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AC010401.1-201ENST00000463867 348 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AC104629.2-201ENST00000468627 598 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 HMGB3P14-201ENST00000494195 599 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AC020893.1-201ENST00000502452 580 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AC093763.2-201ENST00000505334 1223 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 RNA5SP164-201ENST00000516533 110 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 IGLV2-28-201ENST00000520681 304 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 UBE2NP1-201ENST00000545592 458 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AC011602.1-201ENST00000546484 331 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3S2P59780 AL845331.3-202ENST00000562856 261 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.22□□□□□ -1.89
AP3S2P59780 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 MIR6868-201ENST00000611215 58 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 AL354950.1-201ENST00000614150 568 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 CDRT1-208ENST00000630868 794 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.22□□□□□ -1.89
AP3S2P59780 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3S2P59780 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.22□□□□□ -1.89
AP3S2P59780 MTND4P34-201ENST00000572715 1371 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 C4BPAP1-201ENST00000415474 1893 ntBASIC3.22□□□□□ -1.89
AP3S2P59780 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
AP3S2P59780 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
AP3S2P59780 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
AP3S2P59780 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
AP3S2P59780 DNAJC19P6-201ENST00000401853 280 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 CRYBB2P1-203ENST00000415709 538 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AC108032.1-201ENST00000416706 207 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3S2P59780 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3S2P59780 MRPS31P2-201ENST00000451581 518 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 RPS3AP53-201ENST00000454716 778 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 OR7L1P-201ENST00000456181 380 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.21□□□□□ -1.9
AP3S2P59780 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.21□□□□□ -1.9
AP3S2P59780 RPL23AP44-201ENST00000482216 473 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AL133372.1-201ENST00000493565 745 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 TXNP6-201ENST00000510190 310 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.21□□□□□ -1.9
AP3S2P59780 FABP5P12-201ENST00000515543 389 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AC010476.1-201ENST00000519111 851 ntBASIC3.21□□□□□ -1.9
AP3S2P59780 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.21□□□□□ -1.9
AP3S2P59780 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms