Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 VDAC1P6-201ENST00000430062 855 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 YWHAEP5-201ENST00000431545 765 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 TPTE2P1-204ENST00000435256 593 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN18P56856 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN18P56856 AP000873.1-201ENST00000463987 400 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 RN7SL271P-201ENST00000487601 295 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 RPS4XP15-201ENST00000489210 795 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN18P56856 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 AC017037.1-201ENST00000508460 471 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN18P56856 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN18P56856 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.59□□□□□ -1.83
CLDN18P56856 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLDN18P56856 AC025260.1-201ENST00000548858 430 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC090751.1-201ENST00000566966 267 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC022968.1-201ENST00000567372 442 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN18P56856 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.59□□□□□ -1.83
CLDN18P56856 AC104662.1-201ENST00000604448 511 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AL592436.1-201ENST00000605135 558 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC024023.1-201ENST00000624530 922 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC138649.5-201ENST00000637456 137 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 AC022031.1-201ENST00000585985 2593 ntBASIC3.59□□□□□ -1.83
CLDN18P56856 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
CLDN18P56856 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN18P56856 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLDN18P56856 AC106871.1-201ENST00000568324 3102 ntBASIC3.59□□□□□ -1.84
CLDN18P56856 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CLDN18P56856 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CLDN18P56856 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN18P56856 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 FAM91A3P-201ENST00000456826 2544 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
CLDN18P56856 RNA5SP388-201ENST00000362584 119 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 RNA5SP399-201ENST00000364003 117 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 SNORA70E-201ENST00000384492 135 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 DNAJC19P6-201ENST00000401853 280 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AL445189.1-201ENST00000405722 338 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 HMGB1P13-201ENST00000406019 642 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 MTATP6P31-201ENST00000406985 692 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 MIR1303-201ENST00000408625 86 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN18P56856 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN18P56856 RPS29P7-201ENST00000439662 171 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN18P56856 RPL9P32-201ENST00000464118 620 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 RPS20P21-201ENST00000466859 343 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.58□□□□□ -1.84
CLDN18P56856 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CLDN18P56856 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN18P56856 HNRNPKP5-201ENST00000515300 253 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 RNU2-58P-201ENST00000516403 183 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN18P56856 COX6B1P6-201ENST00000522347 255 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 YPEL5P3-201ENST00000547227 352 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.58□□□□□ -1.84
CLDN18P56856 CENPUP2-201ENST00000555897 1186 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN18P56856 AGGF1P8-201ENST00000562979 1000 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 AC103858.2-201ENST00000621471 543 ntBASIC3.58□□□□□ -1.84
CLDN18P56856 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN18P56856 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
CLDN18P56856 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.58□□□□□ -1.84
CLDN18P56856 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLDN18P56856 AC016588.2-201ENST00000632484 3021 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLDN18P56856 ZNF603P-201ENST00000405613 487 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN18P56856 RNU4-74P-201ENST00000411280 161 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN18P56856 MTCO1P8-201ENST00000416914 1523 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 RPL7P2-201ENST00000427639 268 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC122718.1-201ENST00000439448 744 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms