Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COPAP53621 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 DBF4P1-201ENST00000412976 1892 ntBASIC5.01□□□□□ -1.61
COPAP53621 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.01□□□□□ -1.61
COPAP53621 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 RNA5SP505-201ENST00000364748 108 ntBASIC5.01□□□□□ -1.61
COPAP53621 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 SNORA70.10-201ENST00000384515 134 ntBASIC5.01□□□□□ -1.61
COPAP53621 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 RNU6-757P-201ENST00000410334 100 ntBASIC5.01□□□□□ -1.61
COPAP53621 RNU2-42P-201ENST00000410697 113 ntBASIC5.01□□□□□ -1.61
COPAP53621 RNU4-72P-201ENST00000410754 173 ntBASIC5.01□□□□□ -1.61
COPAP53621 PTP4A1P5-201ENST00000420305 455 ntBASIC5.01□□□□□ -1.61
COPAP53621 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.01□□□□□ -1.61
COPAP53621 RWDD4P2-201ENST00000426392 563 ntBASIC5.01□□□□□ -1.61
COPAP53621 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 UBE2D3P1-201ENST00000436669 444 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC092473.1-201ENST00000441098 221 ntBASIC5.01□□□□□ -1.61
COPAP53621 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.01□□□□□ -1.61
COPAP53621 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 CYCSP34-201ENST00000458172 304 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC112206.1-201ENST00000468416 477 ntBASIC5.01□□□□□ -1.61
COPAP53621 GAPDHP36-201ENST00000480688 918 ntBASIC5.01□□□□□ -1.61
COPAP53621 RN7SL459P-201ENST00000481078 302 ntBASIC5.01□□□□□ -1.61
COPAP53621 RN7SL441P-201ENST00000492388 296 ntBASIC5.01□□□□□ -1.61
COPAP53621 CEACAMP10-202ENST00000495431 496 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 RNA5SP249-201ENST00000516127 99 ntBASIC5.01□□□□□ -1.61
COPAP53621 RNA5SP392-201ENST00000516905 112 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.01□□□□□ -1.61
COPAP53621 RPL23AP53-201ENST00000521854 457 ntBASIC5.01□□□□□ -1.61
COPAP53621 AP001189.2-201ENST00000527320 189 ntBASIC5.01□□□□□ -1.61
COPAP53621 OR5AN2P-201ENST00000534535 896 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.01□□□□□ -1.61
COPAP53621 SERPINE4P-201ENST00000554978 281 ntBASIC5.01□□□□□ -1.61
COPAP53621 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 AC002400.1-201ENST00000569310 726 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 NF1P5-201ENST00000588287 448 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC040904.1-201ENST00000590850 223 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC010620.1-201ENST00000601088 1102 ntBASIC5.01□□□□□ -1.61
COPAP53621 OR6R2P-201ENST00000609216 300 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC131235.4-201ENST00000609288 620 ntBASIC5.01□□□□□ -1.61
COPAP53621 AL023881.1-201ENST00000621088 301 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC116618.1-201ENST00000634617 774 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC103706.2-201ENST00000638080 240 ntBASIC5.01□□□□□ -1.61
COPAP53621 AC068137.4-201ENST00000638485 296 ntBASIC5.01□□□□□ -1.61
COPAP53621 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 AP000776.1-201ENST00000530032 1663 ntBASIC5.01□□□□□ -1.61
COPAP53621 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COPAP53621 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.01□□□□□ -1.61
COPAP53621 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COPAP53621 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COPAP53621 SLC10A5P1-201ENST00000379063 1306 ntBASIC5□□□□□ -1.61
COPAP53621 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COPAP53621 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 FAM3C2-201ENST00000312214 681 ntBASIC5□□□□□ -1.61
COPAP53621 SNORD116-23-201ENST00000384645 92 ntBASIC5□□□□□ -1.61
COPAP53621 RPS4XP9-201ENST00000405151 780 ntBASIC5□□□□□ -1.61
COPAP53621 RPL23AP47-201ENST00000408017 460 ntBASIC5□□□□□ -1.61
COPAP53621 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5□□□□□ -1.61
COPAP53621 AC234781.2-201ENST00000426370 994 ntBASIC5□□□□□ -1.61
COPAP53621 COX6CP13-201ENST00000428703 226 ntBASIC5□□□□□ -1.61
COPAP53621 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5□□□□□ -1.61
COPAP53621 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 AURKAPS2-201ENST00000454983 333 ntBASIC5□□□□□ -1.61
COPAP53621 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COPAP53621 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COPAP53621 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5□□□□□ -1.61
COPAP53621 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5□□□□□ -1.61
COPAP53621 AC126121.1-201ENST00000482313 553 ntBASIC5□□□□□ -1.61
COPAP53621 AC079395.1-201ENST00000510981 262 ntBASIC5□□□□□ -1.61
COPAP53621 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5□□□□□ -1.61
COPAP53621 RNU6-202P-201ENST00000515998 96 ntBASIC5□□□□□ -1.61
COPAP53621 RN7SKP96-201ENST00000516948 297 ntBASIC5□□□□□ -1.61
COPAP53621 IGKV1-32-201ENST00000519290 311 ntBASIC5□□□□□ -1.61
COPAP53621 AC087373.1-201ENST00000524920 491 ntBASIC5□□□□□ -1.61
COPAP53621 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5□□□□□ -1.61
COPAP53621 ELOCP32-201ENST00000548625 324 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms