Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCNKAP51800 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AC011477.5-201ENST00000586571 259 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC061975.8-201ENST00000587058 721 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 PCNAP1-202ENST00000595299 752 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AC007349.4-201ENST00000608114 532 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC024257.5-201ENST00000612739 531 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC234782.5-201ENST00000617723 324 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCNKAP51800 AC000123.2-201ENST00000623124 461 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 OR1S1-201ENST00000624470 978 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCNKAP51800 CU459211.1-201ENST00000635667 749 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 MTND2P41-201ENST00000637599 773 ntBASIC4.42□□□□□ -1.7
CLCNKAP51800 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCNKAP51800 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLCNKAP51800 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCNKAP51800 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCNKAP51800 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCNKAP51800 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC025031.4-201ENST00000621248 3271 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 RNU4-92P-201ENST00000363783 136 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 RNA5SP28-201ENST00000363841 119 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 RNU6-317P-201ENST00000384031 107 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AL079342.2-201ENST00000403367 482 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 FCF1P5-201ENST00000406490 482 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 Z75741.2-201ENST00000417272 1167 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 Z74021.1-201ENST00000423610 407 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC016712.1-201ENST00000431088 378 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 RPL7P34-201ENST00000433316 712 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 AL031663.1-201ENST00000437445 219 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 CBX1P4-201ENST00000439415 457 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 VN1R40P-201ENST00000455196 941 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC002456.2-201ENST00000509356 380 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 IGLVIV-65-201ENST00000517313 360 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AP001636.2-201ENST00000525517 696 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 MTCO2P15-201ENST00000532655 656 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC044913.1-201ENST00000557200 430 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCNKAP51800 MIR4277-201ENST00000578298 84 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 MIR5708-201ENST00000579723 85 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
CLCNKAP51800 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC016877.3-201ENST00000606778 504 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC090948.1-201ENST00000607464 549 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC020634.1-201ENST00000608701 549 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC009237.17-201ENST00000618111 748 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC022079.1-201ENST00000621546 602 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC109454.4-201ENST00000623411 649 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 AC116563.2-201ENST00000624751 535 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 ATE1-AS1-202ENST00000636460 506 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 OR2L1P-202ENST00000641567 1023 ntBASIC4.41□□□□□ -1.7
CLCNKAP51800 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CLCNKAP51800 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCNKAP51800 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CLCNKAP51800 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.7
CLCNKAP51800 AC000367.1-201ENST00000452711 1766 ntBASIC4.4□□□□□ -1.7
CLCNKAP51800 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CLCNKAP51800 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.7
CLCNKAP51800 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.4□□□□□ -1.7
CLCNKAP51800 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms