Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
FEN1P39748 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4□□□□□ -1.77
FEN1P39748 VN1R79P-201ENST00000593540 513 ntBASIC4□□□□□ -1.77
FEN1P39748 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4□□□□□ -1.77
FEN1P39748 AP000240.1-201ENST00000609910 452 ntBASIC4□□□□□ -1.77
FEN1P39748 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4□□□□□ -1.77
FEN1P39748 AC011944.2-201ENST00000624440 683 ntBASIC4□□□□□ -1.77
FEN1P39748 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4□□□□□ -1.77
FEN1P39748 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4□□□□□ -1.77
FEN1P39748 AC013437.2-201ENST00000639587 677 ntBASIC4□□□□□ -1.77
FEN1P39748 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
FEN1P39748 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
FEN1P39748 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 AL627171.1-201ENST00000618845 1308 ntBASIC3.99□□□□□ -1.77
FEN1P39748 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 RNU1-14P-201ENST00000362759 152 ntBASIC3.99□□□□□ -1.77
FEN1P39748 RNU1-32P-201ENST00000363937 159 ntBASIC3.99□□□□□ -1.77
FEN1P39748 RNA5SP513-201ENST00000364648 118 ntBASIC3.99□□□□□ -1.77
FEN1P39748 RNU6-298P-201ENST00000390888 96 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AL603865.2-201ENST00000401679 213 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC092638.1-201ENST00000411966 1275 ntBASIC3.99□□□□□ -1.77
FEN1P39748 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.99□□□□□ -1.77
FEN1P39748 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.99□□□□□ -1.77
FEN1P39748 CYP4F29P-201ENST00000420685 446 ntBASIC3.99□□□□□ -1.77
FEN1P39748 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 AC092809.1-201ENST00000441469 474 ntBASIC3.99□□□□□ -1.77
FEN1P39748 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 AC005002.1-201ENST00000447458 540 ntBASIC3.99□□□□□ -1.77
FEN1P39748 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 AC104306.1-201ENST00000449702 371 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.99□□□□□ -1.77
FEN1P39748 AC006511.1-201ENST00000470614 315 ntBASIC3.99□□□□□ -1.77
FEN1P39748 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.99□□□□□ -1.77
FEN1P39748 AC138701.1-201ENST00000524329 714 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC009643.1-201ENST00000532030 391 ntBASIC3.99□□□□□ -1.77
FEN1P39748 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.99□□□□□ -1.77
FEN1P39748 AC006518.2-201ENST00000542513 940 ntBASIC3.99□□□□□ -1.77
FEN1P39748 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.99□□□□□ -1.77
FEN1P39748 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.99□□□□□ -1.77
FEN1P39748 AC124068.1-201ENST00000563131 678 ntBASIC3.99□□□□□ -1.77
FEN1P39748 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC023824.3-201ENST00000569003 562 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.99□□□□□ -1.77
FEN1P39748 EIF1P6-201ENST00000600054 334 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC018754.1-201ENST00000607486 925 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC013468.1-201ENST00000608680 598 ntBASIC3.99□□□□□ -1.77
FEN1P39748 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 AC010608.3-201ENST00000625048 527 ntBASIC3.99□□□□□ -1.77
FEN1P39748 MIR7641-1-201ENST00000627518 61 ntBASIC3.99□□□□□ -1.77
FEN1P39748 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.99□□□□□ -1.77
FEN1P39748 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
FEN1P39748 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
FEN1P39748 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 AC095050.2-201ENST00000510748 1458 ntBASIC3.98□□□□□ -1.77
FEN1P39748 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.98□□□□□ -1.77
FEN1P39748 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.98□□□□□ -1.77
FEN1P39748 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 NSRP1P1-201ENST00000444067 1693 ntBASIC3.98□□□□□ -1.77
FEN1P39748 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
FEN1P39748 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
FEN1P39748 SNORD74.4-201ENST00000364129 80 ntBASIC3.98□□□□□ -1.77
FEN1P39748 RNU1-132P-201ENST00000364300 164 ntBASIC3.98□□□□□ -1.77
FEN1P39748 AC234782.4-201ENST00000417646 1048 ntBASIC3.98□□□□□ -1.77
FEN1P39748 AC114814.2-201ENST00000419195 485 ntBASIC3.98□□□□□ -1.77
FEN1P39748 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.98□□□□□ -1.77
FEN1P39748 HMGB1P45-201ENST00000435986 653 ntBASIC3.98□□□□□ -1.77
FEN1P39748 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.98□□□□□ -1.77
FEN1P39748 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.98□□□□□ -1.77
FEN1P39748 SEPT14P24-201ENST00000447236 180 ntBASIC3.98□□□□□ -1.77
FEN1P39748 AL050341.1-201ENST00000447743 313 ntBASIC3.98□□□□□ -1.77
FEN1P39748 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.98□□□□□ -1.77
FEN1P39748 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.98□□□□□ -1.77
FEN1P39748 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.98□□□□□ -1.77
FEN1P39748 RPL37P3-201ENST00000456825 293 ntBASIC3.98□□□□□ -1.77
FEN1P39748 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
FEN1P39748 RPL35P6-201ENST00000490024 372 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms