Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.36□□□□□ -1.55
COL15A1P39059 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.36□□□□□ -1.55
COL15A1P39059 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 RPS3AP37-201ENST00000419176 745 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AC018644.1-201ENST00000429934 551 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 RPL23AP46-201ENST00000438548 490 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.36□□□□□ -1.55
COL15A1P39059 AC244505.3-201ENST00000454598 187 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 RNA5SP103-201ENST00000459503 118 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 RPL23AP2-201ENST00000471227 466 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 BNIP3P41-201ENST00000503774 571 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AC119751.5-201ENST00000514077 770 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 RNU6-513P-201ENST00000516104 104 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 DUXAP3-201ENST00000603616 594 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.36□□□□□ -1.55
COL15A1P39059 AC013468.1-201ENST00000608680 598 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.36□□□□□ -1.55
COL15A1P39059 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.36□□□□□ -1.55
COL15A1P39059 AP002782.1-201ENST00000623107 614 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AC093775.1-201ENST00000624154 1868 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.36□□□□□ -1.55
COL15A1P39059 AC012442.3-202ENST00000636742 206 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL15A1P39059 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL15A1P39059 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL15A1P39059 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL15A1P39059 HSPA8P17-201ENST00000427029 1382 ntBASIC5.36□□□□□ -1.55
COL15A1P39059 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.36□□□□□ -1.55
COL15A1P39059 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL15A1P39059 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL15A1P39059 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL15A1P39059 AC013404.1-201ENST00000413068 249 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 RPS24P7-201ENST00000416921 246 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 EIF1P3-201ENST00000423841 334 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.35□□□□□ -1.55
COL15A1P39059 MTCO1P52-201ENST00000433928 531 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 ARL4AP3-201ENST00000441452 574 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 HMGB3P6-201ENST00000444896 598 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.35□□□□□ -1.55
COL15A1P39059 FTH1P25-201ENST00000447665 469 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AL133547.1-201ENST00000448546 220 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.35□□□□□ -1.55
COL15A1P39059 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL15A1P39059 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.35□□□□□ -1.55
COL15A1P39059 AC111193.1-201ENST00000504097 155 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AC119751.1-201ENST00000513357 765 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 MTATP6P15-201ENST00000527233 835 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.35□□□□□ -1.55
COL15A1P39059 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 AC027104.1-201ENST00000563702 681 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AC095057.3-201ENST00000567102 1157 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AC022655.2-201ENST00000577280 318 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 MIR4298-201ENST00000584380 73 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 SLC25A36P1-201ENST00000590111 465 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 AC099669.2-201ENST00000616549 437 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 MIR6500-201ENST00000622700 86 ntBASIC5.35□□□□□ -1.55
COL15A1P39059 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
COL15A1P39059 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL15A1P39059 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
COL15A1P39059 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COL15A1P39059 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL15A1P39059 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.35□□□□□ -1.55
COL15A1P39059 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL15A1P39059 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.34□□□□□ -1.55
COL15A1P39059 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 SEC63P2-201ENST00000503863 1939 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AL022311.1-201ENST00000623726 19416 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 RNA5SP124-201ENST00000362739 110 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.34□□□□□ -1.55
COL15A1P39059 HIGD1AP4-201ENST00000430194 280 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 EEF1A1P39-201ENST00000440791 250 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 CASP3P1-201ENST00000446037 609 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AL589880.1-201ENST00000448271 287 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 AC104687.1-201ENST00000485829 412 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 AC104108.1-201ENST00000509930 412 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 MTND4P33-201ENST00000556706 766 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.34□□□□□ -1.55
COL15A1P39059 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.34□□□□□ -1.55
COL15A1P39059 MTND3P13-201ENST00000574391 343 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AC005412.1-201ENST00000580812 1049 ntBASIC5.34□□□□□ -1.55
COL15A1P39059 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.34□□□□□ -1.55
COL15A1P39059 AC025588.2-201ENST00000604851 466 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms