Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD13P35453 HLA-N-201ENST00000437516 135 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AL162388.1-201ENST00000450912 352 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 RPL6P9-201ENST00000466502 859 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 RPL35P6-201ENST00000490024 372 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 KRT19P6-201ENST00000510983 209 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 OR8I1P-201ENST00000529291 931 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD13P35453 MIR4504-201ENST00000577413 92 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD13P35453 AC090330.1-201ENST00000588646 764 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 AL390816.3-201ENST00000604527 1066 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 MIR6748-201ENST00000610433 71 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AC099669.2-201ENST00000616549 437 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD13P35453 VN1R7P-201ENST00000619242 903 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXD13P35453 MIR4496-201ENST00000635896 61 ntBASIC4.66□□□□□ -1.66
HOXD13P35453 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXD13P35453 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD13P35453 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXD13P35453 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HOXD13P35453 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HOXD13P35453 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
HOXD13P35453 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.65□□□□□ -1.66
HOXD13P35453 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
HOXD13P35453 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD13P35453 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD13P35453 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD13P35453 AC233981.1-201ENST00000423224 461 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC010881.1-201ENST00000433830 235 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 RAB11AP1-201ENST00000442978 646 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXD13P35453 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD13P35453 RPS26P28-201ENST00000470806 348 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC104982.1-201ENST00000478775 574 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD13P35453 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD13P35453 AC079203.1-201ENST00000487972 404 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 STMN1P2-201ENST00000508435 439 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 PPBPP1-201ENST00000510807 373 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD13P35453 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.65□□□□□ -1.67
HOXD13P35453 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD13P35453 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXD13P35453 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD13P35453 PSMB7P1-201ENST00000556349 514 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD13P35453 AGGF1P6-201ENST00000569213 976 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD13P35453 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD13P35453 AL606834.3-201ENST00000602615 496 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD13P35453 AC010680.4-201ENST00000605334 543 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AP003117.2-201ENST00000606010 545 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AC092953.2-201ENST00000608000 699 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AL031666.3-201ENST00000609320 1006 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 AP000255.1-201ENST00000610276 676 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 FAM27D1-201ENST00000612308 341 ntBASIC4.65□□□□□ -1.67
HOXD13P35453 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HOXD13P35453 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD13P35453 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HOXD13P35453 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD13P35453 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD13P35453 KPNA2P2-201ENST00000419546 1489 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
HOXD13P35453 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXD13P35453 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXD13P35453 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HOXD13P35453 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXD13P35453 RNU6-984P-201ENST00000363236 109 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 RNA5SP366-201ENST00000365454 123 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXD13P35453 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD13P35453 RNU2-21P-201ENST00000410368 188 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 VN1R51P-201ENST00000411675 945 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 AL160275.2-201ENST00000412010 394 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 FAR2P2-201ENST00000413041 594 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 AL450992.3-201ENST00000413192 568 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 AC011933.1-201ENST00000413334 321 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXD13P35453 RPS7P9-201ENST00000414704 586 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 RPS23P10-201ENST00000416185 486 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 P2RY10P2-201ENST00000416730 913 ntBASIC4.64□□□□□ -1.67
HOXD13P35453 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXD13P35453 MTND4P3-201ENST00000417829 541 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms