Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFC4P35249 Z73965.1-201ENST00000623412 2297 ntBASIC4.7□□□□□ -1.66
RFC4P35249 AL592437.2-201ENST00000421655 2434 ntBASIC4.7□□□□□ -1.66
RFC4P35249 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RFC4P35249 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC4P35249 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.69□□□□□ -1.66
RFC4P35249 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC4P35249 BOLA3P4-201ENST00000418151 400 ntBASIC4.69□□□□□ -1.66
RFC4P35249 AC245054.1-201ENST00000420944 258 ntBASIC4.69□□□□□ -1.66
RFC4P35249 AC069285.2-201ENST00000440210 275 ntBASIC4.69□□□□□ -1.66
RFC4P35249 RNU6-1218P-201ENST00000458990 108 ntBASIC4.69□□□□□ -1.66
RFC4P35249 CCNHP1-201ENST00000513311 678 ntBASIC4.69□□□□□ -1.66
RFC4P35249 RANP9-201ENST00000519957 271 ntBASIC4.69□□□□□ -1.66
RFC4P35249 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.69□□□□□ -1.66
RFC4P35249 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.69□□□□□ -1.66
RFC4P35249 AC006116.10-201ENST00000591836 581 ntBASIC4.69□□□□□ -1.66
RFC4P35249 MIMT1-201ENST00000597105 1050 ntBASIC4.69□□□□□ -1.66
RFC4P35249 AC010200.2-201ENST00000605098 235 ntBASIC4.69□□□□□ -1.66
RFC4P35249 AL513477.2-201ENST00000607858 568 ntBASIC4.69□□□□□ -1.66
RFC4P35249 MIR7154-201ENST00000620673 73 ntBASIC4.69□□□□□ -1.66
RFC4P35249 AC079684.1-201ENST00000621405 437 ntBASIC4.69□□□□□ -1.66
RFC4P35249 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFC4P35249 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC4P35249 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFC4P35249 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.69□□□□□ -1.66
RFC4P35249 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RFC4P35249 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFC4P35249 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.68□□□□□ -1.66
RFC4P35249 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.68□□□□□ -1.66
RFC4P35249 SNORA38.1-201ENST00000364172 131 ntBASIC4.68□□□□□ -1.66
RFC4P35249 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.68□□□□□ -1.66
RFC4P35249 AC005326.1-201ENST00000429197 123 ntBASIC4.68□□□□□ -1.66
RFC4P35249 UBE2V2P1-201ENST00000434717 398 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AL591503.2-201ENST00000442314 1005 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AC073587.1-201ENST00000447093 876 ntBASIC4.68□□□□□ -1.66
RFC4P35249 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.68□□□□□ -1.66
RFC4P35249 AL136126.1-201ENST00000473603 402 ntBASIC4.68□□□□□ -1.66
RFC4P35249 RPL7P24-201ENST00000493052 752 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AC108471.1-201ENST00000513977 287 ntBASIC4.68□□□□□ -1.66
RFC4P35249 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.68□□□□□ -1.66
RFC4P35249 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.68□□□□□ -1.66
RFC4P35249 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.68□□□□□ -1.66
RFC4P35249 MIR5186-201ENST00000577504 120 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.68□□□□□ -1.66
RFC4P35249 MIR7851-201ENST00000610611 160 ntBASIC4.68□□□□□ -1.66
RFC4P35249 AL133370.2-201ENST00000619934 439 ntBASIC4.68□□□□□ -1.66
RFC4P35249 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
RFC4P35249 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RFC4P35249 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC4P35249 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.67□□□□□ -1.66
RFC4P35249 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 OR51C1P-202ENST00000641159 1444 ntBASIC4.67□□□□□ -1.66
RFC4P35249 OR10J6P-201ENST00000289731 930 ntBASIC4.67□□□□□ -1.66
RFC4P35249 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC4P35249 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.67□□□□□ -1.66
RFC4P35249 RNA5SP146-201ENST00000410743 123 ntBASIC4.67□□□□□ -1.66
RFC4P35249 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.67□□□□□ -1.66
RFC4P35249 AC048351.1-201ENST00000420064 602 ntBASIC4.67□□□□□ -1.66
RFC4P35249 AC073069.1-201ENST00000428657 441 ntBASIC4.67□□□□□ -1.66
RFC4P35249 MTCO3P21-201ENST00000430791 643 ntBASIC4.67□□□□□ -1.66
RFC4P35249 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.67□□□□□ -1.66
RFC4P35249 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC4P35249 RBMY2UP-201ENST00000453474 324 ntBASIC4.67□□□□□ -1.66
RFC4P35249 OR7E13P-201ENST00000526052 910 ntBASIC4.67□□□□□ -1.66
RFC4P35249 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC4P35249 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.67□□□□□ -1.66
RFC4P35249 AC084757.1-201ENST00000559987 490 ntBASIC4.67□□□□□ -1.66
RFC4P35249 CYP4A43P-201ENST00000568156 121 ntBASIC4.67□□□□□ -1.66
RFC4P35249 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
RFC4P35249 AC006077.1-201ENST00000604746 343 ntBASIC4.67□□□□□ -1.66
RFC4P35249 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC4P35249 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC4P35249 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC4P35249 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC4P35249 AL133383.2-201ENST00000622958 2336 ntBASIC4.66□□□□□ -1.66
RFC4P35249 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC4P35249 RNA5SP424-201ENST00000390988 115 ntBASIC4.66□□□□□ -1.66
RFC4P35249 SNORD65-201ENST00000391079 73 ntBASIC4.66□□□□□ -1.66
RFC4P35249 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC4P35249 AC005300.1-201ENST00000428401 373 ntBASIC4.66□□□□□ -1.66
RFC4P35249 AL035458.1-201ENST00000433096 585 ntBASIC4.66□□□□□ -1.66
RFC4P35249 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC4P35249 RPL26P28-201ENST00000451325 435 ntBASIC4.66□□□□□ -1.66
RFC4P35249 AL049873.1-201ENST00000480540 376 ntBASIC4.66□□□□□ -1.66
RFC4P35249 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC4P35249 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC4P35249 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms