Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC026979.1-201ENST00000492525 396 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC108043.1-201ENST00000512696 574 ntBASIC4.93□□□□□ -1.62
CIITAP33076 RNU6-347P-201ENST00000516658 105 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.93□□□□□ -1.62
CIITAP33076 DEFB130C-202ENST00000530001 230 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.93□□□□□ -1.62
CIITAP33076 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 AC090515.3-201ENST00000560431 315 ntBASIC4.93□□□□□ -1.62
CIITAP33076 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.93□□□□□ -1.62
CIITAP33076 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.93□□□□□ -1.62
CIITAP33076 AC021171.1-201ENST00000603137 706 ntBASIC4.93□□□□□ -1.62
CIITAP33076 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC114781.5-201ENST00000615297 108 ntBASIC4.93□□□□□ -1.62
CIITAP33076 AC091304.6-201ENST00000619761 202 ntBASIC4.93□□□□□ -1.62
CIITAP33076 FP325313.1-201ENST00000638228 703 ntBASIC4.93□□□□□ -1.62
CIITAP33076 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CIITAP33076 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CIITAP33076 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
CIITAP33076 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 DDX18P3-201ENST00000404856 2007 ntBASIC4.92□□□□□ -1.62
CIITAP33076 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
CIITAP33076 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 RNU1-87P-201ENST00000363727 170 ntBASIC4.92□□□□□ -1.62
CIITAP33076 RNA5SP22-201ENST00000365393 109 ntBASIC4.92□□□□□ -1.62
CIITAP33076 RNA5SP366-201ENST00000365454 123 ntBASIC4.92□□□□□ -1.62
CIITAP33076 SNORA62-201ENST00000365493 153 ntBASIC4.92□□□□□ -1.62
CIITAP33076 Y_RNA.578-201ENST00000390903 88 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC011933.1-201ENST00000413334 321 ntBASIC4.92□□□□□ -1.62
CIITAP33076 LINC01881-201ENST00000416103 412 ntBASIC4.92□□□□□ -1.62
CIITAP33076 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.92□□□□□ -1.62
CIITAP33076 ELOCP9-201ENST00000418624 239 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.92□□□□□ -1.62
CIITAP33076 ACTR3P2-201ENST00000439585 1257 ntBASIC4.92□□□□□ -1.62
CIITAP33076 EEF1A1P39-201ENST00000440791 250 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL512326.1-201ENST00000443050 721 ntBASIC4.92□□□□□ -1.62
CIITAP33076 MTCYBP42-201ENST00000444653 1130 ntBASIC4.92□□□□□ -1.62
CIITAP33076 RPS27AP15-201ENST00000447672 466 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.92□□□□□ -1.62
CIITAP33076 AC112492.1-201ENST00000449607 712 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL035407.2-201ENST00000454090 378 ntBASIC4.92□□□□□ -1.62
CIITAP33076 USP9YP25-201ENST00000457708 443 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC116533.1-201ENST00000459748 321 ntBASIC4.92□□□□□ -1.62
CIITAP33076 RPL35AP15-201ENST00000468042 339 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 RN7SL817P-201ENST00000480777 288 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC041039.1-201ENST00000485656 536 ntBASIC4.92□□□□□ -1.62
CIITAP33076 DEFB109F-201ENST00000491870 277 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC091167.1-201ENST00000492017 396 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC091951.3-201ENST00000504093 246 ntBASIC4.92□□□□□ -1.62
CIITAP33076 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.92□□□□□ -1.62
CIITAP33076 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.92□□□□□ -1.62
CIITAP33076 AC008759.1-201ENST00000589783 983 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL354984.3-201ENST00000604803 325 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 AL355816.1-201ENST00000607951 118 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC005962.2-201ENST00000611427 652 ntBASIC4.92□□□□□ -1.62
CIITAP33076 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.92□□□□□ -1.62
CIITAP33076 AC123768.4-201ENST00000616244 701 ntBASIC4.92□□□□□ -1.62
CIITAP33076 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 AC015726.3-201ENST00000624501 418 ntBASIC4.92□□□□□ -1.62
CIITAP33076 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CIITAP33076 AC000123.3-201ENST00000624029 4975 ntBASIC4.92□□□□□ -1.62
CIITAP33076 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CIITAP33076 AC139713.2-215ENST00000641428 5037 ntBASIC4.91□□□□□ -1.62
CIITAP33076 ASNSP1-201ENST00000518311 1939 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC111188.2-201ENST00000529697 1387 ntBASIC4.91□□□□□ -1.62
CIITAP33076 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CIITAP33076 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
CIITAP33076 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CIITAP33076 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CIITAP33076 OR5H2-201ENST00000355273 945 ntBASIC4.91□□□□□ -1.62
CIITAP33076 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CIITAP33076 RNU6-1214P-201ENST00000363650 109 ntBASIC4.91□□□□□ -1.62
CIITAP33076 SNORD116-8-201ENST00000384365 95 ntBASIC4.91□□□□□ -1.62
CIITAP33076 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.91□□□□□ -1.62
CIITAP33076 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CIITAP33076 AL583835.1-201ENST00000399570 407 ntBASIC4.91□□□□□ -1.62
CIITAP33076 DNAJC19P6-201ENST00000401853 280 ntBASIC4.91□□□□□ -1.62
CIITAP33076 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.91□□□□□ -1.62
CIITAP33076 VTA1P1-201ENST00000414044 866 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.91□□□□□ -1.62
CIITAP33076 P2RY10P2-201ENST00000416730 913 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AC004448.2-201ENST00000422360 586 ntBASIC4.91□□□□□ -1.62
CIITAP33076 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.91□□□□□ -1.62
CIITAP33076 AL157831.1-201ENST00000426134 473 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms