Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC106028.5-201ENST00000610332 395 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 AC108359.1-201ENST00000616451 1211 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 AC109583.2-201ENST00000617367 129 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 AC073530.2-201ENST00000623987 261 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 AC104964.3-201ENST00000606115 2860 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
TNFSF4P23510 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TNFSF4P23510 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
TNFSF4P23510 AP001029.2-203ENST00000589795 4910 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFSF4P23510 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFSF4P23510 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.63□□□□□ -1.67
TNFSF4P23510 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TNFSF4P23510 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TNFSF4P23510 AC104260.2-201ENST00000623551 3497 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 AC073429.2-201ENST00000569694 1444 ntBASIC4.63□□□□□ -1.67
TNFSF4P23510 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
TNFSF4P23510 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 AL031985.3-201ENST00000565390 2449 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC090337.1-201ENST00000579651 2074 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 CR381670.1-201ENST00000624291 1693 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TNFSF4P23510 RN7SKP185-201ENST00000362813 326 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RNU6-660P-201ENST00000364566 109 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 U3.29-201ENST00000391296 212 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 AL021407.1-201ENST00000404531 386 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RNA5SP487-201ENST00000410186 122 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RN7SKP266-201ENST00000410232 287 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 RNU2-15P-201ENST00000410692 191 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 HMGB1P11-201ENST00000413899 637 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 NPM1P4-201ENST00000414095 812 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AL590233.1-201ENST00000430017 456 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 MTND1P30-201ENST00000441241 901 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 MTND2P4-201ENST00000445034 1004 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 MTCO1P27-201ENST00000448269 226 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 BX322784.1-201ENST00000455793 1077 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC104563.1-201ENST00000476147 376 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC022133.1-201ENST00000490961 571 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 ATP5LP3-201ENST00000514223 304 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC092851.1-201ENST00000535964 478 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AL121766.1-201ENST00000547436 487 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 PSMB7P1-201ENST00000556349 514 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC107954.1-201ENST00000565906 727 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC141257.3-201ENST00000572906 215 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC000068.2-201ENST00000608816 460 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AC073869.8-201ENST00000641806 335 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 AL513185.3-201ENST00000433335 1300 ntBASIC4.62□□□□□ -1.67
TNFSF4P23510 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
TNFSF4P23510 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
TNFSF4P23510 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.62□□□□□ -1.67
TNFSF4P23510 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
TNFSF4P23510 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TNFSF4P23510 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
TNFSF4P23510 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.61□□□□□ -1.67
TNFSF4P23510 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.61□□□□□ -1.67
TNFSF4P23510 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TNFSF4P23510 RNA5SP234-201ENST00000363916 119 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 U3.15-201ENST00000365398 212 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
TNFSF4P23510 RNU6-821P-201ENST00000390995 107 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.61□□□□□ -1.67
TNFSF4P23510 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.61□□□□□ -1.67
TNFSF4P23510 SRSF1P1-201ENST00000424058 520 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.61□□□□□ -1.67
TNFSF4P23510 AC098826.1-201ENST00000433943 471 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.61□□□□□ -1.67
TNFSF4P23510 AL117351.1-201ENST00000438864 766 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 SDCBPP1-201ENST00000440192 890 ntBASIC4.61□□□□□ -1.67
TNFSF4P23510 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.61□□□□□ -1.67
TNFSF4P23510 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.61□□□□□ -1.67
TNFSF4P23510 GAPDHP25-201ENST00000447061 1001 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms