Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC3P19447 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC3P19447 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
ERCC3P19447 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC3P19447 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
ERCC3P19447 AL645927.1-201ENST00000396783 406 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AL078595.1-201ENST00000404458 226 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC3P19447 GLRXP1-201ENST00000423261 334 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 RPS27P18-201ENST00000431701 247 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC109583.1-201ENST00000432156 268 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 AL356276.2-201ENST00000435919 558 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC073614.1-201ENST00000438690 650 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AL031667.1-201ENST00000440222 725 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.46□□□□□ -1.38
ERCC3P19447 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 RPS21P4-201ENST00000487122 248 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AP001025.2-201ENST00000490908 477 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC231760.1-201ENST00000498002 260 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 DEFB108A-201ENST00000530110 222 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC022878.1-201ENST00000530684 149 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 AC024224.1-201ENST00000538284 609 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.46□□□□□ -1.38
ERCC3P19447 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.46□□□□□ -1.38
ERCC3P19447 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 AC025588.3-201ENST00000604182 274 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AL445222.1-201ENST00000607259 628 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC126118.1-201ENST00000607744 628 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 RPSAP73-201ENST00000614820 330 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC138965.3-201ENST00000623875 498 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC012020.1-201ENST00000624541 1728 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 AC110994.2-201ENST00000635481 492 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC3P19447 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC3P19447 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC3P19447 AC107027.3-201ENST00000565095 3473 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.46□□□□□ -1.38
ERCC3P19447 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
ERCC3P19447 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
ERCC3P19447 ADAM24P-201ENST00000398655 2101 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 PHKBP1-201ENST00000450951 1951 ntBASIC6.46□□□□□ -1.38
ERCC3P19447 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
ERCC3P19447 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
ERCC3P19447 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
ERCC3P19447 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
ERCC3P19447 RNA5SP453-201ENST00000362503 119 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 RNU4-44P-201ENST00000363050 141 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 SNORD1C-201ENST00000363315 78 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 RPL23AP27-201ENST00000415161 451 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AL121878.1-201ENST00000418638 859 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC3P19447 RPS3AP54-201ENST00000435535 734 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 OR6D1P-201ENST00000436165 939 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC3P19447 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.45□□□□□ -1.38
ERCC3P19447 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 HIGD1AP8-201ENST00000453927 274 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.45□□□□□ -1.38
ERCC3P19447 RN7SL329P-201ENST00000467740 299 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 ACTR3P3-201ENST00000480448 893 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 HMGB1P36-201ENST00000487709 576 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 RN7SL808P-201ENST00000496066 299 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC112204.1-201ENST00000502591 103 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC3P19447 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC3P19447 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.45□□□□□ -1.38
ERCC3P19447 SNORA18.6-201ENST00000516792 115 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 COX6CP8-201ENST00000522620 226 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC3P19447 AC009852.2-201ENST00000567898 485 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC3P19447 COX6CP4-201ENST00000605798 228 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AL022394.1-201ENST00000606979 292 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC000068.2-201ENST00000608816 460 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.45□□□□□ -1.38
ERCC3P19447 AP001506.1-201ENST00000615444 211 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AL450326.2-201ENST00000421913 1962 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.45□□□□□ -1.38
ERCC3P19447 AP002001.2-201ENST00000529025 1469 ntBASIC6.45□□□□□ -1.38
ERCC3P19447 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
ERCC3P19447 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
ERCC3P19447 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms