Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC067904.2-201ENST00000517322 1283 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.12□□□□□ -1.75
TPM1P09493 AP003730.1-201ENST00000524605 285 ntBASIC4.12□□□□□ -1.75
TPM1P09493 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 AP005901.4-201ENST00000577336 569 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.12□□□□□ -1.75
TPM1P09493 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 LLPHP1-201ENST00000603571 367 ntBASIC4.12□□□□□ -1.75
TPM1P09493 ARF4P1-201ENST00000605447 541 ntBASIC4.12□□□□□ -1.75
TPM1P09493 RNU4-89P-201ENST00000607443 133 ntBASIC4.12□□□□□ -1.75
TPM1P09493 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.12□□□□□ -1.75
TPM1P09493 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
TPM1P09493 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TPM1P09493 AC058791.1-201ENST00000608412 3198 ntBASIC4.12□□□□□ -1.75
TPM1P09493 SYT14P1-202ENST00000600441 1448 ntBASIC4.12□□□□□ -1.75
TPM1P09493 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM1P09493 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM1P09493 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 RNU6-317P-201ENST00000384031 107 ntBASIC4.11□□□□□ -1.75
TPM1P09493 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 EI24P2-201ENST00000397776 1076 ntBASIC4.11□□□□□ -1.75
TPM1P09493 RPL26P37-201ENST00000411983 438 ntBASIC4.11□□□□□ -1.75
TPM1P09493 ELOCP11-201ENST00000436690 332 ntBASIC4.11□□□□□ -1.75
TPM1P09493 ELOCP16-201ENST00000444494 332 ntBASIC4.11□□□□□ -1.75
TPM1P09493 EIF2S2P2-201ENST00000447161 982 ntBASIC4.11□□□□□ -1.75
TPM1P09493 NPM1P17-201ENST00000479221 602 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.11□□□□□ -1.75
TPM1P09493 RNA5SP208-201ENST00000516156 78 ntBASIC4.11□□□□□ -1.75
TPM1P09493 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.11□□□□□ -1.75
TPM1P09493 AC137768.1-201ENST00000549998 553 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AC012531.5-201ENST00000611375 151 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AP000346.3-201ENST00000622821 210 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AC073530.2-201ENST00000623987 261 ntBASIC4.11□□□□□ -1.75
TPM1P09493 AF001550.2-201ENST00000636643 217 ntBASIC4.11□□□□□ -1.75
TPM1P09493 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TPM1P09493 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.11□□□□□ -1.75
TPM1P09493 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM1P09493 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TPM1P09493 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM1P09493 RNU6-283P-201ENST00000364788 107 ntBASIC4.1□□□□□ -1.75
TPM1P09493 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TPM1P09493 RNA5SP424-201ENST00000390988 115 ntBASIC4.1□□□□□ -1.75
TPM1P09493 CYB5AP4-201ENST00000396692 399 ntBASIC4.1□□□□□ -1.75
TPM1P09493 ZNF602P-201ENST00000405929 924 ntBASIC4.1□□□□□ -1.75
TPM1P09493 HMGB3P20-201ENST00000417997 600 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 NDUFA5P10-201ENST00000432147 357 ntBASIC4.1□□□□□ -1.75
TPM1P09493 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AL138799.3-201ENST00000438968 350 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 AL162151.2-201ENST00000448875 158 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.1□□□□□ -1.75
TPM1P09493 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.1□□□□□ -1.75
TPM1P09493 RPL6P9-201ENST00000466502 859 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 RAC1P2-201ENST00000511164 579 ntBASIC4.1□□□□□ -1.75
TPM1P09493 NDUFA5P2-201ENST00000519723 344 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 PTP4A1P6-201ENST00000531034 478 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.1□□□□□ -1.75
TPM1P09493 TGIF1P1-201ENST00000558095 802 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.1□□□□□ -1.75
TPM1P09493 MIR5096-201ENST00000583713 70 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AC007687.1-201ENST00000602704 304 ntBASIC4.1□□□□□ -1.75
TPM1P09493 AL450489.1-201ENST00000612071 468 ntBASIC4.1□□□□□ -1.75
TPM1P09493 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TPM1P09493 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TPM1P09493 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TPM1P09493 AL353746.1-201ENST00000566293 6881 ntBASIC4.09□□□□□ -1.75
TPM1P09493 ZNF826P-207ENST00000622273 1910 ntBASIC4.09□□□□□ -1.75
TPM1P09493 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TPM1P09493 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 U3.22-201ENST00000391120 215 ntBASIC4.09□□□□□ -1.75
TPM1P09493 GSTA12P-201ENST00000402398 508 ntBASIC4.09□□□□□ -1.75
TPM1P09493 MRPS18BP2-201ENST00000434310 759 ntBASIC4.09□□□□□ -1.75
TPM1P09493 SNORA71B-202ENST00000439232 272 ntBASIC4.09□□□□□ -1.75
TPM1P09493 ARL5AP3-201ENST00000439327 386 ntBASIC4.09□□□□□ -1.75
TPM1P09493 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.09□□□□□ -1.75
TPM1P09493 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.09□□□□□ -1.75
TPM1P09493 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.09□□□□□ -1.75
TPM1P09493 AC087312.1-201ENST00000471411 480 ntBASIC4.09□□□□□ -1.75
TPM1P09493 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms