Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD4P09016 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD4P09016 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD4P09016 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXD4P09016 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXD4P09016 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD4P09016 CYP4A43P-201ENST00000568156 121 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 AC245100.7-201ENST00000609678 442 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD4P09016 NXPH1-205ENST00000602349 1953 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD4P09016 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD4P09016 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXD4P09016 AL122126.1-201ENST00000546905 1318 ntBASIC3.92□□□□□ -1.78
HOXD4P09016 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD4P09016 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD4P09016 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD4P09016 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 AL118496.1-201ENST00000440201 1812 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 AC097504.1-201ENST00000515103 2415 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 AC008033.1-201ENST00000216407 1162 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD4P09016 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 RNA5SP175-201ENST00000364275 119 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 AL359837.1-201ENST00000381357 287 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RNU6-207P-201ENST00000384137 107 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RNU6-628P-201ENST00000410675 107 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RN7SKP167-201ENST00000411047 285 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 VN1R51P-201ENST00000411675 945 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 MTCO2P8-201ENST00000412213 658 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC010385.1-201ENST00000412374 256 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC241520.1-201ENST00000422654 1099 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 Z74021.1-201ENST00000423610 407 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 AC069540.1-201ENST00000446320 988 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD4P09016 HMGB1P16-201ENST00000447155 540 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 snoU109.3-201ENST00000459477 145 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RPS17P11-201ENST00000474297 293 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC041039.1-201ENST00000485656 536 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC118282.1-201ENST00000506408 765 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 SAP18P1-201ENST00000512058 390 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC090151.1-201ENST00000520784 730 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC021451.1-201ENST00000523498 1129 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC092851.1-201ENST00000535964 478 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC091515.1-201ENST00000548110 679 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 MTND1P24-201ENST00000552175 861 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 NPM1P47-201ENST00000560843 856 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD4P09016 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 AP000919.1-202ENST00000581139 1264 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC245389.1-201ENST00000605141 529 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RNU6-1192P-201ENST00000612197 107 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 FAM27D1-201ENST00000612308 341 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 VN1R9P-201ENST00000614184 867 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 RMST_10.1-201ENST00000616309 154 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 RNU6-489P-201ENST00000618289 107 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 AC139769.3-201ENST00000618383 175 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HOXD4P09016 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD4P09016 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 MFSD8-213ENST00000641134 1327 ntBASIC3.91□□□□□ -1.78
HOXD4P09016 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD4P09016 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD4P09016 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD4P09016 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
HOXD4P09016 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HOXD4P09016 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.78
HOXD4P09016 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.9□□□□□ -1.78
HOXD4P09016 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.9□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms