Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 GOT2P5-201ENST00000433995 546 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 MTND2P2-201ENST00000434633 945 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL353597.2-202ENST00000434901 373 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 CASP3P1-201ENST00000446037 609 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AC023598.1-201ENST00000472521 361 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 ACTG1P13-201ENST00000486987 1043 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 HNRNPCP4-201ENST00000571636 900 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AC017076.1-201ENST00000607613 578 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 AL357559.1-201ENST00000622228 274 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.56□□□□□ -1.84
HLA-DQB2P05538 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HLA-DQB2P05538 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC068533.1-201ENST00000418542 415 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 MTND4LP13-201ENST00000425022 298 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 RWDD4P2-201ENST00000426392 563 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC022022.1-201ENST00000430304 178 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 ATP5JP1-201ENST00000431631 322 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 PPIAP17-201ENST00000438507 471 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AL157884.3-201ENST00000448273 1184 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC007967.1-201ENST00000455422 1159 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 U3.44-201ENST00000458938 192 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 RWDD4P1-201ENST00000488019 565 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 MIR3922-201ENST00000585192 84 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC004825.2-201ENST00000616634 455 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AL445437.1-201ENST00000623157 3087 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 BX005019.1-201ENST00000561881 1810 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AC134882.1-201ENST00000603738 1676 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 AL365440.1-201ENST00000436135 2167 ntBASIC3.55□□□□□ -1.84
HLA-DQB2P05538 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DQB2P05538 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 NMD3P1-201ENST00000439704 1488 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 MIR3074-201ENST00000384885 81 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 CYP4F29P-201ENST00000420685 446 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 SEC63P1-201ENST00000425785 1258 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 TRGV7-201ENST00000427089 353 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AL365396.1-201ENST00000430854 671 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC091286.1-201ENST00000431233 461 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 HSPD1P21-201ENST00000436541 245 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 RPL7P15-201ENST00000461190 712 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AP000563.1-201ENST00000490865 758 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 SNORA26.10-201ENST00000516427 141 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 SNORA70.17-201ENST00000516449 133 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 IGKV2D-19-201ENST00000523346 262 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC103843.2-201ENST00000530523 682 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC067852.3-201ENST00000589177 561 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DQB2P05538 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
HLA-DQB2P05538 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 Z73965.1-201ENST00000623412 2297 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HLA-DQB2P05538 RNU6-167P-201ENST00000384292 106 ntBASIC3.53□□□□□ -1.84
HLA-DQB2P05538 RN7SKP177-201ENST00000410567 355 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms