Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
MBD4O95243 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.04□□□□□ -1.6
MBD4O95243 RN7SKP33-201ENST00000410942 340 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC096533.1-201ENST00000411645 353 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC092638.1-201ENST00000411966 1275 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.04□□□□□ -1.6
MBD4O95243 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.04□□□□□ -1.6
MBD4O95243 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 OR4C10P-201ENST00000434991 931 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.04□□□□□ -1.6
MBD4O95243 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.04□□□□□ -1.6
MBD4O95243 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.04□□□□□ -1.6
MBD4O95243 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 RN7SKP21-201ENST00000516503 220 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.04□□□□□ -1.6
MBD4O95243 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.04□□□□□ -1.6
MBD4O95243 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 AC100770.1-201ENST00000532310 322 ntBASIC5.04□□□□□ -1.6
MBD4O95243 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 AC022655.2-201ENST00000577280 318 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.04□□□□□ -1.6
MBD4O95243 AC026979.4-201ENST00000606555 645 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC097504.2-201ENST00000608088 454 ntBASIC5.04□□□□□ -1.6
MBD4O95243 AC112503.1-201ENST00000608436 391 ntBASIC5.04□□□□□ -1.6
MBD4O95243 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.04□□□□□ -1.6
MBD4O95243 AC090506.2-201ENST00000624521 419 ntBASIC5.04□□□□□ -1.6
MBD4O95243 MIR492-201ENST00000638676 116 ntBASIC5.04□□□□□ -1.6
MBD4O95243 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.04□□□□□ -1.6
MBD4O95243 MFSD8-220ENST00000641243 1422 ntBASIC5.04□□□□□ -1.6
MBD4O95243 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
MBD4O95243 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 AC026951.1-201ENST00000559530 2459 ntBASIC5.03□□□□□ -1.6
MBD4O95243 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
MBD4O95243 RNU6-236P-201ENST00000363886 106 ntBASIC5.03□□□□□ -1.6
MBD4O95243 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 MIR620-201ENST00000385232 95 ntBASIC5.03□□□□□ -1.6
MBD4O95243 MIR1179-201ENST00000408703 91 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.03□□□□□ -1.6
MBD4O95243 OR8G2P-201ENST00000412796 908 ntBASIC5.03□□□□□ -1.6
MBD4O95243 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.03□□□□□ -1.6
MBD4O95243 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.03□□□□□ -1.6
MBD4O95243 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.03□□□□□ -1.6
MBD4O95243 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC073335.1-201ENST00000427776 363 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC234064.1-201ENST00000436312 247 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 GSTA7P-201ENST00000438425 448 ntBASIC5.03□□□□□ -1.6
MBD4O95243 ARL4AP3-201ENST00000441452 574 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.03□□□□□ -1.6
MBD4O95243 AC114755.5-201ENST00000447760 831 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.03□□□□□ -1.6
MBD4O95243 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 AC069306.1-201ENST00000507006 843 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.03□□□□□ -1.6
MBD4O95243 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 AC008694.2-201ENST00000517591 306 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC090819.1-201ENST00000523800 1111 ntBASIC5.03□□□□□ -1.6
MBD4O95243 HMGB3P26-201ENST00000560051 582 ntBASIC5.03□□□□□ -1.6
MBD4O95243 NIFKP8-201ENST00000560500 874 ntBASIC5.03□□□□□ -1.6
MBD4O95243 MIR4458-201ENST00000578872 75 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.03□□□□□ -1.6
MBD4O95243 AC017100.2-201ENST00000584628 355 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 AF129408.1-201ENST00000608767 431 ntBASIC5.03□□□□□ -1.6
MBD4O95243 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 VN1R74P-201ENST00000613259 503 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AL158196.1-201ENST00000616786 434 ntBASIC5.03□□□□□ -1.6
MBD4O95243 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.03□□□□□ -1.6
MBD4O95243 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
MBD4O95243 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.03□□□□□ -1.6
MBD4O95243 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.03□□□□□ -1.6
MBD4O95243 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MBD4O95243 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
MBD4O95243 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
MBD4O95243 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
MBD4O95243 RNU1-13P-201ENST00000384499 162 ntBASIC5.02□□□□□ -1.61
MBD4O95243 RNA5SP372-201ENST00000390836 115 ntBASIC5.02□□□□□ -1.61
MBD4O95243 RNU11-4P-201ENST00000391149 133 ntBASIC5.02□□□□□ -1.61
MBD4O95243 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.02□□□□□ -1.61
MBD4O95243 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.02□□□□□ -1.61
MBD4O95243 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.02□□□□□ -1.61
MBD4O95243 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.02□□□□□ -1.61
MBD4O95243 SKP1P3-201ENST00000429280 487 ntBASIC5.02□□□□□ -1.61
MBD4O95243 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.02□□□□□ -1.61
MBD4O95243 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.02□□□□□ -1.61
MBD4O95243 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.02□□□□□ -1.61
MBD4O95243 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.02□□□□□ -1.61
MBD4O95243 RNA5SP246-201ENST00000458909 119 ntBASIC5.02□□□□□ -1.61
MBD4O95243 AC079804.1-201ENST00000461922 436 ntBASIC5.02□□□□□ -1.61
MBD4O95243 NAP1L1P3-201ENST00000462291 880 ntBASIC5.02□□□□□ -1.61
MBD4O95243 RPS7P7-201ENST00000463499 571 ntBASIC5.02□□□□□ -1.61
MBD4O95243 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.02□□□□□ -1.61
MBD4O95243 AC091860.1-201ENST00000505723 432 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms