Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AC092647.1-201ENST00000420654 287 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 OR8F1P-201ENST00000425243 930 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AL121601.2-201ENST00000438019 707 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.32□□□□□ -1.4
GRIN3BO60391 ARL2BPP10-201ENST00000446487 531 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 EEF1A1P1-201ENST00000447052 739 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 WASF1P1-201ENST00000447560 1131 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RPS27AP15-201ENST00000447672 466 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AC112206.1-201ENST00000468416 477 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RPL31P58-201ENST00000469001 379 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 CR383656.1-201ENST00000484916 377 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RPS27P23-201ENST00000487608 251 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 AP002812.1-201ENST00000495378 474 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RNY4P37-201ENST00000516225 96 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 RNU6-1261P-201ENST00000517194 104 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 AP001880.2-201ENST00000538233 448 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 NPM1P42-201ENST00000560329 862 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AC136618.2-201ENST00000575091 400 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.32□□□□□ -1.4
GRIN3BO60391 MIR3939-201ENST00000582614 106 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.32□□□□□ -1.4
GRIN3BO60391 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 BNIP3P11-201ENST00000603878 563 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 AP000648.2-201ENST00000624182 404 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.32□□□□□ -1.4
GRIN3BO60391 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 CYP1D1P-201ENST00000416662 1433 ntBASIC6.32□□□□□ -1.4
GRIN3BO60391 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
GRIN3BO60391 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
GRIN3BO60391 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 RNF6P1-201ENST00000444889 1784 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 AL121886.1-201ENST00000358609 435 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 RNA5SP326-201ENST00000363209 110 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 RNU6-433P-201ENST00000363216 104 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 SNORA70.4-201ENST00000365509 134 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 RNU6-729P-201ENST00000384399 107 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 MIR181A1-201ENST00000385026 110 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
GRIN3BO60391 EI24P3-201ENST00000399046 1062 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AL136131.1-201ENST00000406079 803 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 RPS3AP24-201ENST00000407896 734 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 OR7E125P-201ENST00000443450 846 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 FDX1P2-201ENST00000450769 375 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 SNRPFP4-201ENST00000456366 242 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 FCF1P3-201ENST00000496394 590 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC011352.3-201ENST00000505162 593 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 RPL7L1P13-201ENST00000511702 739 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 MTCO1P35-201ENST00000515270 228 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.31□□□□□ -1.4
GRIN3BO60391 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AP003080.1-202ENST00000526526 915 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.31□□□□□ -1.4
GRIN3BO60391 DEFB108A-201ENST00000530110 222 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 SLC2A13P1-201ENST00000531560 322 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.31□□□□□ -1.4
GRIN3BO60391 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AC137627.1-201ENST00000545761 289 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.31□□□□□ -1.4
GRIN3BO60391 TRAV15-201ENST00000556680 249 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.31□□□□□ -1.4
GRIN3BO60391 AC022884.3-201ENST00000579571 248 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.31□□□□□ -1.4
GRIN3BO60391 RNU6-88P-201ENST00000606801 100 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC004067.1-201ENST00000608733 700 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC055764.2-201ENST00000610089 670 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 AC012409.3-201ENST00000611343 981 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC6.31□□□□□ -1.4
GRIN3BO60391 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
GRIN3BO60391 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.31□□□□□ -1.4
GRIN3BO60391 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.31□□□□□ -1.4
GRIN3BO60391 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 ZNF402P-201ENST00000404435 3100 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 AL355488.2-201ENST00000609909 2850 ntBASIC6.31□□□□□ -1.4
GRIN3BO60391 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
GRIN3BO60391 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms