Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRTM2O43300 TPTE2P6-202ENST00000445572 1007 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 XKRYP5-201ENST00000449659 483 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 RPL21P103-201ENST00000479921 488 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AL132838.2-201ENST00000492041 314 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRTM2O43300 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRTM2O43300 AC121161.1-201ENST00000510606 652 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRTM2O43300 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRTM2O43300 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRTM2O43300 AL121594.4-201ENST00000556211 1196 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRTM2O43300 TVP23BP1-201ENST00000557500 617 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRTM2O43300 AL109741.3-201ENST00000561748 592 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AC122134.1-202ENST00000569111 1201 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRTM2O43300 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AL139395.1-201ENST00000603662 160 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 AL031666.3-201ENST00000609320 1006 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 uc_338.13-201ENST00000618243 179 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.99□□□□□ -1.77
LRRTM2O43300 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRTM2O43300 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
LRRTM2O43300 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRTM2O43300 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRTM2O43300 AC139769.1-204ENST00000472297 1931 ntBASIC3.99□□□□□ -1.77
LRRTM2O43300 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRTM2O43300 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRTM2O43300 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRTM2O43300 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 DCAF13P1-201ENST00000495256 1330 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 HNRNPDP2-201ENST00000406475 478 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRTM2O43300 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRTM2O43300 RPL7P53-201ENST00000421245 739 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRTM2O43300 NPM1P34-201ENST00000428821 893 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AL117339.2-201ENST00000430475 180 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AL096829.2-201ENST00000446582 742 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AL358232.1-201ENST00000448030 501 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC104306.1-201ENST00000449702 371 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 VN1R32P-201ENST00000452234 905 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 RPS20P4-201ENST00000461659 355 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 RPL32P14-201ENST00000463196 378 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 CYCSP20-201ENST00000473154 315 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC104687.1-201ENST00000485829 412 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.98□□□□□ -1.77
LRRTM2O43300 Vault.1-201ENST00000516474 102 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 RNA5SP143-201ENST00000516936 115 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRTM2O43300 AC124068.1-201ENST00000563131 678 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC106734.1-201ENST00000568646 663 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 MIR4444-1-201ENST00000581696 74 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 MIR4444-2-201ENST00000584390 74 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 AC024220.1-201ENST00000603675 484 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC025175.1-201ENST00000606482 759 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC011374.2-201ENST00000607135 526 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC144521.1-201ENST00000607148 956 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRTM2O43300 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AC103858.2-201ENST00000621471 543 ntBASIC3.98□□□□□ -1.77
LRRTM2O43300 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRTM2O43300 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LRRTM2O43300 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRTM2O43300 AL136520.1-201ENST00000600311 1322 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 ZNF33CP-201ENST00000432492 2030 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 AL158163.1-201ENST00000603915 1649 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC008033.1-201ENST00000216407 1162 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 MIR153-1-201ENST00000384914 90 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRTM2O43300 RNU2-17P-201ENST00000410290 190 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 AC008065.1-201ENST00000428525 348 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 NANOGP6-201ENST00000429190 847 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 USP9YP7-201ENST00000436723 430 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.97□□□□□ -1.77
LRRTM2O43300 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRTM2O43300 MOB1AP2-201ENST00000446060 614 ntBASIC3.97□□□□□ -1.77
LRRTM2O43300 RPL23AP43-201ENST00000446445 471 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms