Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NUP35P2-201ENST00000416748 943 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 SLC35E1P1-201ENST00000419313 864 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 BMS1P19-201ENST00000433925 393 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 RPL39P6-201ENST00000448289 150 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 ARPC3P2-201ENST00000457786 533 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC090686.1-201ENST00000481577 749 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 OR2A20P-203ENST00000498397 1268 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC026412.2-201ENST00000512270 1075 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.94□□□□□ -1.62
PHGDHO43175 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.94□□□□□ -1.62
PHGDHO43175 ZNF705CP-201ENST00000530515 889 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 AC008127.2-201ENST00000549925 1075 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 CYCSP40-201ENST00000575927 294 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 AL596327.1-201ENST00000603629 213 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC105254.2-201ENST00000603636 436 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 IMMP1LP3-201ENST00000604197 224 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC024560.3-201ENST00000608482 349 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC092653.1-201ENST00000608509 531 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AC068722.2-201ENST00000618734 544 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PHGDHO43175 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PHGDHO43175 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PHGDHO43175 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 AC009643.2-201ENST00000603543 1448 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.94□□□□□ -1.62
PHGDHO43175 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 ZNF833P-201ENST00000424938 1494 ntBASIC4.94□□□□□ -1.62
PHGDHO43175 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PHGDHO43175 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PHGDHO43175 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PHGDHO43175 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC069218.2-201ENST00000411665 344 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 BTF3L4P1-201ENST00000413813 468 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 RPL23AP39-201ENST00000415533 405 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 NPM1P11-201ENST00000417106 855 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AL953862.1-201ENST00000423016 168 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC005033.1-201ENST00000428904 813 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC244035.1-201ENST00000430042 390 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 MED14P1-201ENST00000430517 648 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.93□□□□□ -1.62
PHGDHO43175 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.93□□□□□ -1.62
PHGDHO43175 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 MTND4P6-201ENST00000438297 472 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 MTND1P30-201ENST00000441241 901 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 MTND2P28-201ENST00000457540 1044 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.93□□□□□ -1.62
PHGDHO43175 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 RPL5P22-201ENST00000480199 884 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 RN7SL591P-201ENST00000496150 292 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 MTCYBP37-201ENST00000510642 1133 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC106038.2-201ENST00000520706 568 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 IGKV2-18-201ENST00000522607 343 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.93□□□□□ -1.62
PHGDHO43175 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 MIR4512-201ENST00000583257 77 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC104687.2-201ENST00000604442 342 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 AC126915.2-201ENST00000610957 190 ntBASIC4.93□□□□□ -1.62
PHGDHO43175 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.93□□□□□ -1.62
PHGDHO43175 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.93□□□□□ -1.62
PHGDHO43175 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms