Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RNU2-17P-201ENST00000410290 190 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 YWHAEP5-201ENST00000431545 765 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN3O15551 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN3O15551 AC092685.1-201ENST00000447960 1243 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 TPRKBP1-201ENST00000456243 481 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC020898.1-201ENST00000474167 787 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN3O15551 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN3O15551 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN3O15551 OR5H4P-201ENST00000510851 923 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 NPM1P41-201ENST00000512920 831 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC026616.1-201ENST00000523157 525 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.27□□□□□ -1.73
CLDN3O15551 OR4A12P-201ENST00000530847 918 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC093227.2-201ENST00000589357 285 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC067852.4-201ENST00000590314 478 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CLDN3O15551 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.27□□□□□ -1.73
CLDN3O15551 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CLDN3O15551 AC128687.2-201ENST00000609657 566 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AC026368.1-201ENST00000614934 690 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN3O15551 AL354798.1-201ENST00000622505 329 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AL118508.4-201ENST00000624142 1176 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.27□□□□□ -1.73
CLDN3O15551 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN3O15551 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
CLDN3O15551 SAGE2P-201ENST00000420011 2126 ntBASIC4.27□□□□□ -1.73
CLDN3O15551 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
CLDN3O15551 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 AC100871.1-201ENST00000507871 1456 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN3O15551 AL445189.1-201ENST00000405722 338 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 MTATP6P31-201ENST00000406985 692 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AL353692.2-201ENST00000407054 335 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AC004022.2-201ENST00000413824 193 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN3O15551 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 ZFAND6P1-201ENST00000434138 605 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 MTCYBP21-201ENST00000443300 1113 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 GAPDHP36-201ENST00000480688 918 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 RN7SL323P-201ENST00000494712 295 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AL139099.1-201ENST00000497398 403 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AC018797.3-201ENST00000513388 1241 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.26□□□□□ -1.73
CLDN3O15551 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 CYCSP30-201ENST00000546447 172 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 AC099669.2-201ENST00000616549 437 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AC073530.2-201ENST00000623987 261 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 AL139811.1-201ENST00000424779 2299 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLDN3O15551 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN3O15551 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 HSPA8P19-201ENST00000505359 1517 ntBASIC4.26□□□□□ -1.73
CLDN3O15551 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.26□□□□□ -1.73
CLDN3O15551 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.26□□□□□ -1.73
CLDN3O15551 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 METTL21EP-201ENST00000298105 713 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN3O15551 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CLDN3O15551 AL603766.1-201ENST00000407763 664 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 SNORA3.3-201ENST00000408712 125 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 VTA1P1-201ENST00000414044 866 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 TCEA1P4-201ENST00000415066 844 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 RSL24D1P8-201ENST00000434442 492 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 KCTD9P3-201ENST00000434597 1169 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 AC007000.2-201ENST00000442564 487 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 CYCSP53-201ENST00000455540 265 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.25□□□□□ -1.73
CLDN3O15551 MTND4LP31-201ENST00000514859 294 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 RNU6-362P-201ENST00000516736 90 ntBASIC4.25□□□□□ -1.73
CLDN3O15551 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.25□□□□□ -1.73
CLDN3O15551 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms