Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 AC005344.1-201ENST00000613391 459 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.49□□□□□ -1.85
UPK1AO00322 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 AC068831.8-201ENST00000620171 435 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 CDRT1-208ENST00000630868 794 ntBASIC3.49□□□□□ -1.85
UPK1AO00322 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1AO00322 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1AO00322 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1AO00322 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 RNA5SP42-201ENST00000364278 115 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 RNU6-532P-201ENST00000384318 107 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 MIR92A2-201ENST00000385299 75 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.48□□□□□ -1.85
UPK1AO00322 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1AO00322 TCEA1P4-201ENST00000415066 844 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 TRGV6-201ENST00000417928 299 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 BTF3P9-201ENST00000418784 283 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.48□□□□□ -1.85
UPK1AO00322 OSTCP5-201ENST00000425293 453 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1AO00322 BMS1P19-201ENST00000433925 393 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 RPS29P7-201ENST00000439662 171 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 IFNWP4-201ENST00000453148 294 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 GAPDHP36-201ENST00000480688 918 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 ACTG1P13-201ENST00000486987 1043 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1AO00322 RPL23AP73-201ENST00000492507 471 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1AO00322 NIPA2P2-201ENST00000496376 1083 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 PRELID3BP5-201ENST00000508612 460 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AC093853.1-201ENST00000515689 483 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 RN7SKP60-201ENST00000516985 239 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1AO00322 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 AP006245.1-201ENST00000522549 120 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 TOMM20P2-201ENST00000540082 421 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AL109741.3-201ENST00000561748 592 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 AC090953.1-201ENST00000604305 1092 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AL163642.2-201ENST00000604722 1019 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1AO00322 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1AO00322 AC016957.2-201ENST00000616998 848 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1AO00322 AC119674.1-212ENST00000641155 993 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 AL445437.1-201ENST00000623157 3087 ntBASIC3.48□□□□□ -1.85
UPK1AO00322 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1AO00322 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1AO00322 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 AP004289.2-201ENST00000444413 1457 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
UPK1AO00322 EXOC5P1-201ENST00000510543 1969 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 AC007685.1-201ENST00000329806 452 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 MIR320B1-201ENST00000390209 79 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
UPK1AO00322 GSTA12P-201ENST00000402398 508 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AL136116.1-201ENST00000403591 381 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 RN7SKP263-201ENST00000411194 309 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.47□□□□□ -1.85
UPK1AO00322 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 TCEA1P2-201ENST00000420496 906 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 OR4F13P-201ENST00000428478 931 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
UPK1AO00322 RNU7-27P-201ENST00000459281 62 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.47□□□□□ -1.85
UPK1AO00322 AC022034.3-201ENST00000471393 478 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 RN7SL132P-201ENST00000478131 296 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
UPK1AO00322 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.47□□□□□ -1.85
UPK1AO00322 RN7SKP141-201ENST00000516167 338 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 RNU6-347P-201ENST00000516658 105 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC067904.2-201ENST00000517322 1283 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 OR7E13P-201ENST00000526052 910 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.47□□□□□ -1.85
UPK1AO00322 HSPE1P5-201ENST00000561489 272 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 MIR5685-201ENST00000579080 79 ntBASIC3.47□□□□□ -1.85
UPK1AO00322 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.47□□□□□ -1.85
UPK1AO00322 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms