Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RPS3AP36-201ENST00000398190 775 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 PTP4A1P1-201ENST00000420539 515 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 RPL18P10-201ENST00000425606 538 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.62□□□□□ -1.51
RFXAPO00287 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.62□□□□□ -1.51
RFXAPO00287 RPL36AP15-201ENST00000444514 266 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.62□□□□□ -1.51
RFXAPO00287 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC007537.2-201ENST00000472093 511 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AP000797.1-201ENST00000478870 387 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 RN7SL817P-201ENST00000480777 288 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AC140172.1-201ENST00000502928 141 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC111000.3-201ENST00000508057 576 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.62□□□□□ -1.51
RFXAPO00287 OR5M7P-201ENST00000526140 972 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 GTF2IP11-201ENST00000526931 420 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC137627.1-201ENST00000545761 289 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.62□□□□□ -1.51
RFXAPO00287 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 ATP5F1P7-201ENST00000567330 760 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC015917.1-201ENST00000579654 510 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.62□□□□□ -1.51
RFXAPO00287 MTCO2P22-201ENST00000603246 681 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AL009028.1-201ENST00000604895 802 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 YWHAEP7-203ENST00000622054 312 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AP000648.2-201ENST00000624182 404 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.62□□□□□ -1.51
RFXAPO00287 AC007996.1-201ENST00000620414 2821 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 AL022578.1-201ENST00000439330 1433 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RFXAPO00287 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AC114774.1-201ENST00000507410 1770 ntBASIC5.62□□□□□ -1.51
RFXAPO00287 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
RFXAPO00287 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.62□□□□□ -1.51
RFXAPO00287 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFXAPO00287 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
RFXAPO00287 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.61□□□□□ -1.51
RFXAPO00287 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
RFXAPO00287 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
RFXAPO00287 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
RFXAPO00287 RNA5SP191-201ENST00000362585 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RNU4-79P-201ENST00000362764 141 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 Y_RNA.58-201ENST00000362807 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RNU6-433P-201ENST00000363216 104 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 Y_RNA.138-201ENST00000363462 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 Y_RNA.154-201ENST00000363624 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RNY3P1-201ENST00000365085 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RNA5SP428-201ENST00000365129 132 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RNY3-201ENST00000365484 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 Y_RNA.490-201ENST00000384413 102 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 Y_RNA.548-201ENST00000384656 105 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RFXAPO00287 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RFXAPO00287 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RFXAPO00287 AC004690.1-201ENST00000418216 328 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.61□□□□□ -1.51
RFXAPO00287 MTCO1P20-201ENST00000425366 358 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 AC092651.1-201ENST00000426110 312 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.61□□□□□ -1.51
RFXAPO00287 RSL24D1P6-201ENST00000426934 401 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 MSL3P1-202ENST00000440028 1468 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RPL5P25-201ENST00000441148 775 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.61□□□□□ -1.51
RFXAPO00287 COX6CP18-201ENST00000448769 222 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.61□□□□□ -1.51
RFXAPO00287 AL445687.2-201ENST00000458156 728 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 snoU13.1-201ENST00000459157 104 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 RPL38P1-201ENST00000460914 211 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 ACTG1P13-201ENST00000486987 1043 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 TRBV5-2-201ENST00000489095 273 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 AC026427.2-201ENST00000506228 536 ntBASIC5.61□□□□□ -1.51
RFXAPO00287 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.61□□□□□ -1.51
RFXAPO00287 RNU6-1045P-201ENST00000516321 107 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms