Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC188H7C350 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 RN7SKP103-201ENST00000363848 320 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AL583835.1-201ENST00000399570 407 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC136624.1-201ENST00000400791 413 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC092638.1-201ENST00000411966 1275 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC188H7C350 RBMY2KP-201ENST00000418221 992 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL590762.4-201ENST00000425885 253 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC104837.2-201ENST00000427236 424 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 RPL23AP52-201ENST00000439311 478 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 RPL35AP28-201ENST00000459730 331 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AC008427.1-201ENST00000503102 655 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AC090281.1-201ENST00000523019 276 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AP001922.4-201ENST00000526967 290 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 BRD9P1-201ENST00000529855 560 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.32□□□□□ -1.72
CCDC188H7C350 OR5D15P-201ENST00000531671 942 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AP006289.1-201ENST00000538089 277 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 GNRHR2P1-201ENST00000555315 631 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 BPTFP1-201ENST00000579209 492 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC017100.2-201ENST00000584628 355 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 AC011492.1-201ENST00000600023 315 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 Z82195.1-201ENST00000604558 398 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AP000255.1-201ENST00000610276 676 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 MIR6748-201ENST00000610433 71 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL049539.1-201ENST00000611964 459 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 RN7SL722P-201ENST00000617780 284 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 RN7SL565P-201ENST00000618246 284 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL023881.1-201ENST00000621088 301 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC007275.1-201ENST00000621243 671 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC073342.3-201ENST00000624211 193 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AL121594.5-201ENST00000631724 573 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC188H7C350 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC188H7C350 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 AL592148.3-201ENST00000608771 2646 ntBASIC4.32□□□□□ -1.72
CCDC188H7C350 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CCDC188H7C350 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC188H7C350 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
CCDC188H7C350 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CCDC188H7C350 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC188H7C350 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC188H7C350 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC188H7C350 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AC103591.2-201ENST00000265259 766 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 OR4K15-201ENST00000305051 1216 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC188H7C350 RNU6-1000P-201ENST00000391066 106 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AC096533.1-201ENST00000411645 353 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 FAR2P2-201ENST00000413041 594 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC188H7C350 RPS15AP40-201ENST00000419621 391 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC188H7C350 ELOCP6-201ENST00000429066 328 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 VN1R54P-201ENST00000435210 1049 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC188H7C350 YWHAZP8-201ENST00000436935 731 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AL050341.1-201ENST00000447743 313 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 ELOCP12-201ENST00000458706 328 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AC126121.1-201ENST00000482313 553 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 RN7SL271P-201ENST00000487601 295 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 RPS27P23-201ENST00000487608 251 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC188H7C350 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC188H7C350 RPL23AP72-201ENST00000492447 435 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 HMGB1P21-201ENST00000502313 581 ntBASIC4.31□□□□□ -1.72
CCDC188H7C350 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC188H7C350 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC188H7C350 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms