Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AL513343.1-201ENST00000451818 792 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 PRSS3P4-201ENST00000453323 162 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 VN1R40P-201ENST00000455196 941 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 OR4A12P-201ENST00000530847 918 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL049874.4-201ENST00000557593 255 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL049634.3-201ENST00000604968 457 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC015802.5-201ENST00000607478 399 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC017076.1-201ENST00000607613 578 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC092354.2-201ENST00000607786 514 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP003392.5-201ENST00000607857 415 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC009093.8-201ENST00000641769 292 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC009229.4-201ENST00000623854 1947 ntBASIC3.76□□□□□ -1.81
TMX2-CTNND1H3BSU7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNA5SP124-201ENST00000362739 110 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-819P-201ENST00000364116 107 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNA5SP387-201ENST00000364226 106 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNA5SP72-201ENST00000364442 117 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNORA73.2-201ENST00000364946 201 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNORA5A-201ENST00000384111 134 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 MIR34B-201ENST00000385076 84 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 ATP5F1P4-201ENST00000397288 746 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNA5SP239-201ENST00000410218 129 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL365396.1-201ENST00000430854 671 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL133244.1-201ENST00000456007 258 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC007424.1-203ENST00000554613 687 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC027281.1-201ENST00000574178 758 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 MIR5187-201ENST00000583479 76 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC067838.1-201ENST00000606064 577 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC008121.2-201ENST00000614647 523 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL354696.1-201ENST00000614652 497 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC012314.7-201ENST00000619693 93 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 U7.8-201ENST00000619968 63 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC007342.8-201ENST00000623278 678 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 AP006248.2-201ENST00000623309 592 ntBASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TMX2-CTNND1H3BSU7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC024560.2-201ENST00000507981 1497 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC007685.1-201ENST00000329806 452 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL589826.1-201ENST00000340697 249 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 MIR208A-201ENST00000362287 71 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-697P-201ENST00000363348 107 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 RNU6-152P-201ENST00000384037 107 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC099336.2-201ENST00000422457 254 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AJ239321.1-201ENST00000424255 564 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL390879.2-203ENST00000426943 1121 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC099560.2-201ENST00000457554 255 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC092045.1-201ENST00000495716 1231 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 UBE2CP3-201ENST00000502715 450 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC117525.1-201ENST00000515228 503 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 MTND1P6-201ENST00000523621 946 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 NPM1P47-201ENST00000560843 856 ntBASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.74□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms