Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 BRK1P2-201ENST00000442875 223 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 REG1CP-206ENST00000447469 496 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 HMGB1P15-201ENST00000453854 435 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 FRG2FP-204ENST00000453982 852 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RN7SL643P-201ENST00000471845 291 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AL163973.1-201ENST00000484753 577 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC093664.1-201ENST00000511779 289 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RN7SKP13-201ENST00000515933 244 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RN7SKP288-201ENST00000516227 268 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 SCARNA11.1-201ENST00000516918 132 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 RNA5SP337-201ENST00000517007 109 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AP000907.2-201ENST00000530827 353 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC093249.1-201ENST00000567049 203 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MIR3146-201ENST00000580367 79 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC021646.1-201ENST00000605469 484 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC141002.1-201ENST00000607025 279 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC090971.5-201ENST00000621102 293 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 MTND5P42-201ENST00000637720 498 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 OR2L1P-202ENST00000641567 1023 ntBASIC5.29□□□□□ -1.56
SHISA3A0PJX4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SHISA3A0PJX4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 RNA5SP375-201ENST00000362975 119 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 MIR548P-201ENST00000408336 84 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 RNU6-1148P-201ENST00000410992 104 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 METTL15P3-201ENST00000415522 1221 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 RPS15AP12-201ENST00000419498 388 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AL645937.1-202ENST00000421799 937 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC093156.1-201ENST00000440382 670 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 MED28P3-201ENST00000444288 531 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC022431.1-201ENST00000450941 438 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AKR1D1P1-201ENST00000457236 936 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 ACA64.4-201ENST00000459070 127 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 RNU6-329P-201ENST00000459618 107 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 SNORD19B-201ENST00000459623 84 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC130509.1-201ENST00000464158 433 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 RPL23AP40-201ENST00000487630 390 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 TRMT10BP1-201ENST00000519377 943 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC078899.1-201ENST00000521432 1185 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 PSMA2P1-201ENST00000526365 646 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 HAUS8P1-201ENST00000549005 542 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC023968.1-201ENST00000560719 475 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC036176.3-201ENST00000602456 418 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC008555.7-201ENST00000605008 583 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC116312.1-201ENST00000606841 314 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AL022345.1-201ENST00000607292 135 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC008121.3-201ENST00000618726 433 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC079684.1-201ENST00000621405 437 ntBASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHISA3A0PJX4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms