Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 OR14L1P-202ENST00000641545 3009 ntBASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.57□□□□□ -1.68
TCRBV7S3A2A0A539 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC005539.1-201ENST00000443768 1479 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-582P-201ENST00000362989 107 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RNU6-1066P-201ENST00000363573 105 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RNA5SP22-201ENST00000365393 109 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 SUGT1P1-201ENST00000379514 476 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 VN1R8P-201ENST00000407739 893 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 SKP1P3-201ENST00000429280 487 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RPS26P40-201ENST00000435209 294 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC092013.1-201ENST00000438795 332 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC004865.1-201ENST00000442276 1003 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 KATNBL1P3-201ENST00000443475 909 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MTCYBP3-201ENST00000445588 1137 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RPL23AP43-201ENST00000446445 471 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 HIGD1AP8-201ENST00000453927 274 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC079804.1-201ENST00000461922 436 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RPL12P20-201ENST00000475538 479 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC082651.2-201ENST00000496833 166 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 RPF2P2-201ENST00000504693 896 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC021146.8-201ENST00000507455 733 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC010587.2-201ENST00000511727 448 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC008694.2-201ENST00000517591 306 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 ELOCP32-201ENST00000548625 324 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 EDDM3DP-201ENST00000554692 434 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 GTF2IP8-201ENST00000560687 584 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC091042.1-201ENST00000579213 173 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC008759.1-201ENST00000589783 983 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC110760.3-201ENST00000598794 467 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MIR7155-201ENST00000615925 56 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC009090.3-201ENST00000616553 565 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MIR6891-201ENST00000618788 93 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MIR7154-201ENST00000620673 73 ntBASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TCRBV7S3A2A0A539 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ZNF542P-204ENST00000482727 1305 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 SNORD116-1-201ENST00000384335 95 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 TAF9BP1-201ENST00000396646 746 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC098592.1-201ENST00000419352 333 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC062016.2-201ENST00000420950 676 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC007394.1-201ENST00000421941 531 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC099336.2-201ENST00000422457 254 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 REREP1Y-201ENST00000422655 198 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC011233.1-201ENST00000422812 283 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL593851.1-201ENST00000426171 157 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 UBE2V1P1-201ENST00000430836 445 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 RPL23AP25-201ENST00000430973 463 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 REREP2Y-201ENST00000439103 200 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 RAB11AP1-201ENST00000442978 646 ntBASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.55□□□□□ -1.68
TCRBV7S3A2A0A539 AC012671.1-201ENST00000451912 203 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms