Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 BNIP3P1-201ENST00000547295 580 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC090515.3-201ENST00000560431 315 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 MIR4660-201ENST00000583549 74 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC083899.3-201ENST00000603413 594 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL596327.1-201ENST00000603629 213 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC005084.1-201ENST00000605160 304 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC018695.5-201ENST00000605872 315 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL353600.1-201ENST00000608148 251 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC024560.3-201ENST00000608482 349 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC012360.2-201ENST00000609349 391 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC106028.5-201ENST00000610332 395 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC123768.4-201ENST00000616244 701 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC092656.1-203ENST00000624134 423 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC079228.1-201ENST00000624774 1049 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC090582.1-201ENST00000636321 199 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL392088.2-201ENST00000637607 285 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AL079343.1-201ENST00000572358 1771 ntBASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PCDHB1Q9Y5F3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SNURFL-201ENST00000309296 343 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 MIR600-201ENST00000385007 98 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RPL23AP29-201ENST00000397284 453 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RAB28P1-201ENST00000411517 641 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 TMBIM7P-201ENST00000418074 855 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 GNG5P5-201ENST00000420444 220 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 KATNBL1P6-201ENST00000453433 915 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC021660.1-201ENST00000465006 554 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 KRT19P6-201ENST00000510983 209 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC010625.1-201ENST00000511296 403 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RNA5SP216-201ENST00000516111 123 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC008802.1-201ENST00000519121 791 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RN7SL52P-201ENST00000584271 284 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC008507.1-201ENST00000587506 734 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC128687.1-201ENST00000605304 619 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC093799.2-201ENST00000610062 578 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 EIF3FP1-201ENST00000613970 806 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RN7SL722P-201ENST00000617780 284 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 RN7SL565P-201ENST00000618246 284 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC087385.3-201ENST00000620477 187 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 AC009878.1-201ENST00000621819 340 ntBASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDHB1Q9Y5F3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 MAPK10-338ENST00000641647 3362 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 RPL21P132-201ENST00000331267 462 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 RNA5SP88-201ENST00000365560 109 ntBASIC5.11□□□□□ -1.59
PCDHB1Q9Y5F3 Y_RNA.559-201ENST00000384686 107 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms