Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 RPL23AP25-201ENST00000430973 463 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AL353997.1-201ENST00000432936 108 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 UBE2V1P13-201ENST00000436983 439 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CEACAMP6-201ENST00000452007 574 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 RNU7-169P-201ENST00000459456 61 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC094085.1-201ENST00000468914 584 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AF186190.1-201ENST00000517470 480 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MIR4470-201ENST00000583453 72 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC072026.1-201ENST00000605023 201 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AL118522.2-201ENST00000616045 615 ntBASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
VPS9D1Q9Y2B5 AC104162.1-201ENST00000430831 2382 ntBASIC7.09□□□□□ -1.28
VPS9D1Q9Y2B5 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
VPS9D1Q9Y2B5 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC015871.3-201ENST00000618835 2261 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC020978.6-201ENST00000571197 3177 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC104837.1-201ENST00000444644 1587 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AL391262.1-201ENST00000556558 1992 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 Y_RNA.48-201ENST00000362710 103 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RN7SKP107-201ENST00000364157 290 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-44P-201ENST00000384045 107 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RPL30P2-201ENST00000414021 291 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RPL21P109-201ENST00000422213 475 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 PPIL1P1-201ENST00000423936 499 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 DUTP4-201ENST00000424782 475 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 FAR2P4-202ENST00000425399 584 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RPL23AP22-201ENST00000437556 453 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 SNORA81.1-201ENST00000458922 177 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 WBP1LP1-201ENST00000460451 896 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC087884.1-201ENST00000469738 328 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AP000797.2-201ENST00000475768 606 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 RPS23P5-201ENST00000495419 428 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC144568.1-201ENST00000520139 137 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC026458.1-201ENST00000564330 438 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC061975.3-201ENST00000583209 244 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC010463.3-201ENST00000594077 500 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 MIR6731-201ENST00000614863 72 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AL353662.3-201ENST00000625131 237 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 MFSD8-217ENST00000641178 4374 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 TCP11X1-202ENST00000622971 1372 ntBASIC7.08□□□□□ -1.28
VPS9D1Q9Y2B5 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RPL10P16-201ENST00000325000 645 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 SNORD81.1-201ENST00000363064 77 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-97P-201ENST00000363387 104 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 Y_RNA.399-201ENST00000383955 105 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 Y_RNA.418-201ENST00000384029 102 ntBASIC7.07□□□□□ -1.28
VPS9D1Q9Y2B5 RNU6-214P-201ENST00000384130 107 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms