Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 MTND6P5-201ENST00000448266 512 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 GAS5-218ENST00000448718 565 ntTSL 2 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC021074.2-201ENST00000468434 172 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 PABPC1P3-201ENST00000469174 459 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL161747.1-201ENST00000480068 358 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 RPL7P6-201ENST00000480903 738 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 COX6B1P6-201ENST00000522347 255 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 MAL2-208ENST00000523307 556 ntTSL 4 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AP005435.4-201ENST00000529514 284 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC124068.1-201ENST00000563131 678 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 COX6CP7-201ENST00000597056 208 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC011890.2-201ENST00000613393 294 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC079776.5-201ENST00000641920 211 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL596244.1-201ENST00000567068 3779 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AL442128.2-201ENST00000620246 1824 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC011416.1-201ENST00000514947 1732 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 AC005592.1-201ENST00000566527 1640 ntBASIC8.54□□□□□ -1.04
PHF8Q9UPP1 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC8.54□□□□□ -1.04
PHF8Q9UPP1 OR52B5P-204ENST00000641744 3467 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 RNF6P1-201ENST00000444889 1784 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AL359922.2-201ENST00000581788 3017 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC003973.3-201ENST00000624863 2822 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 MIR143-201ENST00000385300 106 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 DHFRP6-201ENST00000401776 268 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 MTCO3P45-201ENST00000443036 613 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 HSFY6P-201ENST00000445573 403 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 MTND1P17-201ENST00000448961 204 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC058823.1-201ENST00000485315 474 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AF279873.1-201ENST00000523393 313 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 IGLV3-6-201ENST00000523937 250 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AL713866.2-201ENST00000603579 219 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 AC024651.2-201ENST00000562480 2098 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PHF8Q9UPP1 CUBNP3-201ENST00000457461 1784 ntBASIC8.53□□□□□ -1.04
PHF8Q9UPP1 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC8.52□□□□□ -1.04
PHF8Q9UPP1 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 DDX18P4-201ENST00000511690 1966 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.645-201ENST00000391229 102 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AL360182.1-201ENST00000397433 468 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 GSTA11P-201ENST00000452866 669 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC002553.2-201ENST00000453217 340 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 RPL23AP71-201ENST00000470966 469 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC092865.4-201ENST00000477936 615 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 Y_RNA.654-201ENST00000497848 106 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC095057.1-201ENST00000507583 168 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 AP000763.2-201ENST00000540641 163 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 MIR7973-1-201ENST00000614683 76 ntBASIC8.52□□□□□ -1.05
PHF8Q9UPP1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PHF8Q9UPP1 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms