Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL360157.1-201ENST00000565962 87 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 RNA5SP374-201ENST00000362939 125 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 RNA5SP104-201ENST00000410989 118 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 RPL7P28-201ENST00000437739 740 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AL356535.1-201ENST00000440335 398 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 RN7SL594P-201ENST00000470590 287 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC097462.2-201ENST00000504623 481 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC004069.2-201ENST00000505438 1114 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 AC233309.1-201ENST00000619522 751 ntBASIC4.45□□□□□ -1.7
SCN11AQ9UI33 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.45□□□□□ -1.7
SCN11AQ9UI33 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 MTND4LP20-201ENST00000402379 270 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 HSPE1P27-201ENST00000430808 296 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC074367.1-201ENST00000438685 1125 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 FCF1P3-201ENST00000496394 590 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 PTGES3P3-201ENST00000511479 482 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC011611.1-201ENST00000552179 197 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 MIR4672-201ENST00000583126 81 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 YPEL5P2-201ENST00000605553 359 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SCN11AQ9UI33 AC083843.2-201ENST00000568248 6253 ntBASIC4.44□□□□□ -1.7
SCN11AQ9UI33 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 RNU1-70P-201ENST00000362618 164 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 BX119904.1-201ENST00000432026 348 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 RPS29P31-201ENST00000446147 164 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AL671855.1-201ENST00000446875 1203 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 RPS3AP14-201ENST00000483907 780 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC069499.1-201ENST00000489433 509 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AL121766.1-201ENST00000547436 487 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC009464.1-201ENST00000615731 469 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 AC138932.5-201ENST00000617759 563 ntBASIC4.43□□□□□ -1.7
SCN11AQ9UI33 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SCN11AQ9UI33 RNU1-18P-201ENST00000363062 164 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 MTND4P22-201ENST00000413116 1169 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 RPL23AP71-201ENST00000470966 469 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 HNRNPKP5-201ENST00000515300 253 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AP000926.4-201ENST00000527351 454 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 OOSP1P2-201ENST00000579644 351 ntBASIC4.42□□□□□ -1.7
SCN11AQ9UI33 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN11AQ9UI33 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms