Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 HMGB1P45-201ENST00000435986 653 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RPL7P11-201ENST00000437586 658 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 PRPF38AP2-201ENST00000438179 851 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 GTF3AP5-201ENST00000442645 697 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RPL31P44-201ENST00000447680 377 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 VN1R32P-201ENST00000452234 905 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 IFNWP4-201ENST00000453148 294 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 HMGB1P4-201ENST00000455362 567 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 NDUFA12P1-201ENST00000455914 406 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 MTND6P6-201ENST00000478031 263 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RPL7P16-201ENST00000479738 738 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC073522.1-201ENST00000483312 377 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC112198.1-201ENST00000505369 1220 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC008885.2-201ENST00000509506 930 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC012339.2-201ENST00000523996 453 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 RN7SKP299-201ENST00000606679 301 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AP001521.2-201ENST00000608772 546 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC073114.1-201ENST00000612027 490 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AL158063.1-201ENST00000615349 536 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC006338.2-201ENST00000616864 791 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC007494.3-201ENST00000624660 743 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC005539.1-201ENST00000443768 1479 ntBASIC5.04□□□□□ -1.6
DKK3Q9UBP4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
DKK3Q9UBP4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC126323.6-202ENST00000568092 3511 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 RNU6-984P-201ENST00000363236 109 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 RNU6-1200P-201ENST00000384162 107 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 MTCO3P41-201ENST00000414801 328 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 COX6B1P1-201ENST00000415962 213 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 LINC01881-201ENST00000416103 412 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 OR2AM1P-201ENST00000422137 422 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 GTF2IP23-201ENST00000423746 351 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 RPL12P34-201ENST00000424532 479 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 MTCO1P54-201ENST00000430139 712 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL450023.3-201ENST00000440592 271 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 TXNP5-201ENST00000441043 315 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 HMGB1P16-201ENST00000447155 540 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL935212.3-201ENST00000450729 284 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 DNAJC19P8-201ENST00000452887 259 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL356981.1-201ENST00000454879 684 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL591473.1-201ENST00000464297 313 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC083982.1-201ENST00000485679 344 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC104687.1-201ENST00000485829 412 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC092045.1-201ENST00000495716 1231 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC109445.1-201ENST00000512356 383 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC108471.1-201ENST00000513977 287 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 NIFKP8-201ENST00000560500 874 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 TVP23CP2-201ENST00000571473 623 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 MIR4480-201ENST00000582492 71 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 DEFB131E-202ENST00000602581 683 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 PSMA6P4-201ENST00000603247 718 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC009220.3-201ENST00000604318 586 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC104073.3-201ENST00000610942 955 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC015871.5-202ENST00000623252 701 ntBASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.03□□□□□ -1.6
DKK3Q9UBP4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms