Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 OR9M1P-201ENST00000459641 921 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 APOOP2-201ENST00000461561 539 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 RN7SL542P-201ENST00000467147 294 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 MTND6P6-201ENST00000478031 263 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC104687.1-201ENST00000485829 412 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC017037.1-201ENST00000508460 471 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC010285.3-201ENST00000511668 676 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 SAP18P1-201ENST00000512058 390 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 NDUFA5P2-201ENST00000519723 344 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 MTCO1P49-201ENST00000523429 802 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 CIR1P1-201ENST00000524055 1133 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 POLR2KP1-201ENST00000553226 168 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL671309.1-201ENST00000603750 544 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC079610.2-201ENST00000604818 690 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AL355816.1-201ENST00000607951 118 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AP001033.2-201ENST00000609701 1003 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC078899.5-201ENST00000612475 178 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC123768.4-201ENST00000616244 701 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 AC006042.3-201ENST00000454684 1469 ntBASIC3.54□□□□□ -1.84
CLCF1Q9UBD9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 METTL21EP-201ENST00000298105 713 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 MIR554-201ENST00000384874 96 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 MIR1251-201ENST00000408552 70 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL357078.2-201ENST00000416486 427 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 LINC01347-201ENST00000417964 355 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 Z97055.1-201ENST00000419730 712 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 MTATP6P11-201ENST00000428071 670 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC007537.2-201ENST00000472093 511 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC007688.1-201ENST00000475592 759 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL139099.1-201ENST00000497398 403 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC010468.3-201ENST00000508225 458 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC006499.6-201ENST00000511169 607 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 SNORA76.2-201ENST00000517095 137 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC087369.1-201ENST00000520775 996 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC068790.5-201ENST00000602741 355 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC009318.3-201ENST00000616916 503 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AL356863.1-201ENST00000623378 1080 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 FRG1DP-201ENST00000635586 771 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 AC024341.1-201ENST00000526444 1552 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 RNF6P1-201ENST00000444889 1784 ntBASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCF1Q9UBD9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CLCF1Q9UBD9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
CLCF1Q9UBD9 CYP1D1P-201ENST00000416662 1433 ntBASIC3.53□□□□□ -1.85
CLCF1Q9UBD9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 MTND4P31-201ENST00000425607 1343 ntBASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CLCF1Q9UBD9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms