Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC110794.1-201ENST00000505816 425 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC017037.1-201ENST00000508460 471 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 UBTFL9-201ENST00000534504 1148 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AL162574.2-201ENST00000614618 657 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC112198.2-201ENST00000426589 6996 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AL031679.1-201ENST00000400616 525 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 RPL7P36-201ENST00000444633 681 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC018692.3-201ENST00000623929 123 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC139713.2-210ENST00000641741 992 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 GSTM3P2-201ENST00000412746 530 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AL356535.1-201ENST00000440335 398 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 SLC31A1P1-201ENST00000451221 567 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 UBL5P2-201ENST00000583788 219 ntBASIC3.48□□□□□ -1.85
CHD7Q9P2D1 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CHD7Q9P2D1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 RN7SKP222-201ENST00000410651 315 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 BTF3P9-201ENST00000418784 283 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 DUXAP6-201ENST00000553858 601 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AC112503.1-201ENST00000608436 391 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 CYCSP41-201ENST00000616920 296 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 HMGB1P3-201ENST00000502802 616 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 RNA5SP356-201ENST00000515972 94 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AC020914.4-201ENST00000597690 277 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
CHD7Q9P2D1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC3.47□□□□□ -1.85
CHD7Q9P2D1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CHD7Q9P2D1 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CHD7Q9P2D1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CHD7Q9P2D1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 RPL31P50-201ENST00000471002 296 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 MRPS35P3-201ENST00000603189 709 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC010266.2-201ENST00000564741 3255 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC097504.1-201ENST00000515103 2415 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC010095.1-201ENST00000443543 144 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 HMGN2P7-201ENST00000456186 273 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 NCOA4P2-201ENST00000340589 1813 ntBASIC3.46□□□□□ -1.86
CHD7Q9P2D1 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHD7Q9P2D1 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD7Q9P2D1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD7Q9P2D1 AC096638.2-201ENST00000434965 711 ntBASIC3.45□□□□□ -1.86
CHD7Q9P2D1 BX276092.4-201ENST00000452056 248 ntBASIC3.45□□□□□ -1.86
CHD7Q9P2D1 USP9YP2-201ENST00000504503 1000 ntBASIC3.45□□□□□ -1.86
CHD7Q9P2D1 USP9YP1-201ENST00000513521 1002 ntBASIC3.45□□□□□ -1.86
CHD7Q9P2D1 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.45□□□□□ -1.86
CHD7Q9P2D1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
CHD7Q9P2D1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHD7Q9P2D1 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms