Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 IGLV3-30-201ENST00000524362 298 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AP000859.1-201ENST00000525536 307 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AP003181.2-201ENST00000528941 181 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC243972.3-201ENST00000539655 198 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC008127.2-201ENST00000549925 1075 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 LLPHP1-201ENST00000603571 367 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 COX6CP4-201ENST00000605798 228 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 ERCC6-202ENST00000374127 1782 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNTN3Q9P232 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.33□□□□□ -1.4
CNTN3Q9P232 AP002907.1-201ENST00000606361 1430 ntBASIC6.33□□□□□ -1.4
CNTN3Q9P232 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 RN7SKP69-201ENST00000365390 305 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 RPL7P25-201ENST00000404151 721 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 MTATP6P18-201ENST00000417994 673 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 OR10T1P-201ENST00000424327 947 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 SUMO2P3-201ENST00000438311 288 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AL391987.1-201ENST00000441025 200 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 RPS15AP1-201ENST00000457423 391 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 RPS15AP17-201ENST00000470598 390 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 SNORA19.2-201ENST00000516013 114 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 RNU6-1045P-201ENST00000516321 107 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC093027.1-201ENST00000546698 429 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC099489.2-201ENST00000574976 260 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC008966.2-201ENST00000606157 453 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC078899.5-201ENST00000612475 178 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 DISC2.1-201ENST00000612827 205 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 MIR6862-1-201ENST00000613016 70 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 MIR6862-2-201ENST00000614755 70 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 AC099654.6-201ENST00000636487 512 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.32□□□□□ -1.4
CNTN3Q9P232 TTC41P-205ENST00000551270 3963 ntBASIC6.32□□□□□ -1.4
CNTN3Q9P232 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CNTN3Q9P232 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 AP001284.1-201ENST00000528393 2118 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 RN7SKP81-201ENST00000365603 331 ntBASIC6.31□□□□□ -1.4
CNTN3Q9P232 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CNTN3Q9P232 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
CNTN3Q9P232 RPS4XP8-201ENST00000402039 771 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms