Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC104785.1-201ENST00000603220 588 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AL390816.3-201ENST00000604527 1066 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC018754.1-201ENST00000607486 925 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AF129408.1-201ENST00000608767 431 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 MIR6820-201ENST00000611508 62 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AP003485.1-201ENST00000625093 753 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 AC140479.6-201ENST00000633535 357 ntBASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.81□□□□□ -1.64
BLOC1S4Q9NUP1 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RNU1-32P-201ENST00000363937 159 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 SNORA56-201ENST00000383966 129 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 MIR620-201ENST00000385232 95 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AL121978.1-201ENST00000402778 359 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 GSTA8P-201ENST00000404253 637 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RPS3AP9-201ENST00000417027 792 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 MFSD13B-201ENST00000420133 1290 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 Z77249.1-201ENST00000444622 1175 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 EIF2S2P2-201ENST00000447161 982 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RPL29P29-201ENST00000448725 423 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC009963.2-201ENST00000453431 138 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC244505.3-201ENST00000454598 187 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 S100A11P1-201ENST00000477525 312 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 GAPDHP39-201ENST00000481866 979 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC108145.1-201ENST00000503770 153 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 snoZ278.1-201ENST00000517059 112 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RNU6-1028P-201ENST00000517164 93 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 OR8L1P-201ENST00000534005 955 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC087897.1-201ENST00000550134 156 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 YWHAZP1-201ENST00000556286 722 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC074051.3-201ENST00000570238 358 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AL356218.2-201ENST00000605264 187 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 RNA5SP108-201ENST00000605921 117 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 AC067852.7-201ENST00000623270 535 ntBASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
BLOC1S4Q9NUP1 ELL2P4-201ENST00000446870 1376 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC111188.2-201ENST00000529697 1387 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 ATP5F1P2-201ENST00000398143 760 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 USP9YP21-201ENST00000420603 432 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AL592293.2-201ENST00000422292 996 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC092634.2-201ENST00000428146 1010 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 PPIAP17-201ENST00000438507 471 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 PTGES3P1-201ENST00000439531 483 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 CBX1P1-201ENST00000440184 427 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 RPL6P9-201ENST00000466502 859 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC011276.1-201ENST00000469688 323 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC012170.1-201ENST00000495139 359 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 RNF138P1-201ENST00000502765 546 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 SUMO2P5-201ENST00000506790 245 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC048346.1-201ENST00000510247 144 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 NDUFS5P6-201ENST00000529136 295 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 CR383656.6-201ENST00000550518 394 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 AC007566.2-201ENST00000603642 413 ntBASIC4.79□□□□□ -1.64
BLOC1S4Q9NUP1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms