Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 SEPT7P7-201ENST00000420492 1301 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 IPO8P1-201ENST00000455509 3109 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 MIR1251-201ENST00000408552 70 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL592310.1-201ENST00000414330 671 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LIPT1P1-201ENST00000415870 1186 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 DPY19L1P2-201ENST00000426647 915 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL035246.1-201ENST00000433554 1255 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 MTCO1P52-201ENST00000433928 531 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 HMGB1P37-201ENST00000439613 609 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 ELOCP13-201ENST00000443934 329 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 HSFY3P-201ENST00000444242 1191 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RPL34P26-201ENST00000445636 354 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC010618.1-201ENST00000469924 477 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RN7SL860P-201ENST00000473738 223 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RPS4XP6-201ENST00000477670 797 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC093752.1-206ENST00000511823 336 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC026726.1-201ENST00000512859 601 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 MRPL49P2-201ENST00000521066 465 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 DYNLL1P4-201ENST00000549314 266 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL357094.1-201ENST00000603845 844 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 Z82195.1-201ENST00000604558 398 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AL450336.1-201ENST00000605180 586 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC106052.1-201ENST00000608029 497 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC009974.1-201ENST00000608881 455 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC087683.2-201ENST00000611384 326 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC011472.4-201ENST00000615848 491 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 AC104985.3-201ENST00000623479 597 ntBASIC4.27□□□□□ -1.73
SIX2Q9NPC8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX2Q9NPC8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 RNU6-452P-201ENST00000384406 107 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC104297.1-201ENST00000393779 870 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 FAR2P4-202ENST00000425399 584 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC234779.1-201ENST00000425910 285 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC092447.3-201ENST00000426027 686 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 ATP5HP2-201ENST00000433885 485 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AL356535.1-201ENST00000440335 398 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 OR10R1P-201ENST00000441524 1141 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 YWHAQP9-201ENST00000445891 512 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 SEPT14P24-201ENST00000447236 180 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 SNORD11.1-201ENST00000459482 85 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC037198.2-201ENST00000478845 733 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC069499.1-201ENST00000489433 509 ntBASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX2Q9NPC8 RNU6-1028P-201ENST00000517164 93 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms