Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AL161747.1-201ENST00000480068 358 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 RN7SKP209-201ENST00000516888 304 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 SMARCE1P4-201ENST00000523647 241 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AP003102.1-201ENST00000525638 661 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 OR5AZ1P-201ENST00000527448 943 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AL139174.1-201ENST00000531489 886 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC011611.5-201ENST00000552477 578 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC023825.1-201ENST00000566704 1030 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 MIR4738-201ENST00000579134 87 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 MIR4425-201ENST00000580572 84 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC124283.4-201ENST00000581815 456 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 PCNAP1-202ENST00000595299 752 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AL365503.1-201ENST00000605247 905 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AP000894.4-201ENST00000610185 483 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AL139089.1-201ENST00000620372 975 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 AC104446.1-201ENST00000613728 1321 ntBASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VIPAS39Q9H9C1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 RN7SKP149-201ENST00000363008 344 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 SNORD35B-201ENST00000363660 87 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AL627308.1-201ENST00000435693 821 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 RPS7P5-201ENST00000441482 581 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC006011.1-201ENST00000442758 349 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 RPS17P13-201ENST00000448974 407 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 RPL23AP14-201ENST00000468281 468 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 TPT1P3-201ENST00000492841 512 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 PCBP2P3-201ENST00000509726 843 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 CBX3P5-201ENST00000552017 521 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC115286.1-201ENST00000604298 434 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 AC008121.2-201ENST00000614647 523 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 uc_338.32-201ENST00000615087 172 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 OR6C71P-202ENST00000641886 1107 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.09□□□□□ -1.75
VIPAS39Q9H9C1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 SEC63P2-201ENST00000503863 1939 ntBASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VIPAS39Q9H9C1 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 U6.112-201ENST00000384129 70 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 RNU6-207P-201ENST00000384137 107 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 SNORD65C-201ENST00000390962 71 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AL049697.2-201ENST00000403708 294 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 RNA5SP36-201ENST00000410197 133 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 TMSB10P2-201ENST00000416049 131 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC114814.2-201ENST00000419195 485 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 HMGB1P45-201ENST00000435986 653 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 ELOCP11-201ENST00000436690 332 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC092170.1-201ENST00000440211 356 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 HSFY3P-201ENST00000444242 1191 ntBASIC4.08□□□□□ -1.76
VIPAS39Q9H9C1 ELOCP16-201ENST00000444494 332 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms