Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 AC011416.1-201ENST00000514947 1732 ntBASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 CASC19-246ENST00000641625 1606 ntBASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNTNAP3Q9BZ76 AL049780.3-201ENST00000624612 1583 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RAD17P2-201ENST00000451754 1977 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNA5SP477-201ENST00000362639 119 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-251P-201ENST00000363235 104 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.461-201ENST00000384263 103 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.464-201ENST00000384282 110 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-1081P-201ENST00000384537 107 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-823P-201ENST00000391042 103 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNU2-28P-201ENST00000410457 189 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RNU2-38P-201ENST00000410856 79 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RAC1P4-201ENST00000419413 579 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 EIF4EP1-201ENST00000422311 642 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC233981.1-201ENST00000423224 461 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL353777.1-201ENST00000425552 326 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RSL24D1P6-201ENST00000426934 401 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC064862.4-201ENST00000442180 334 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC009963.2-201ENST00000453431 138 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC011476.1-201ENST00000466725 307 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC021074.2-201ENST00000468434 172 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 FO393415.2-201ENST00000480085 343 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RPL12P30-201ENST00000488389 499 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 IGLVI-42-201ENST00000522485 381 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC013283.1-201ENST00000557282 492 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 TPRX1P1-201ENST00000557620 319 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 VN1R84P-201ENST00000593697 235 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC245052.7-201ENST00000601161 359 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL590032.1-201ENST00000604920 252 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SNORD96A-201ENST00000606577 79 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 MIR6811-201ENST00000620409 58 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AL669831.3-213ENST00000636676 183 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 AC010149.2-201ENST00000637608 315 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF806-201ENST00000438300 1774 ntBASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNTNAP3Q9BZ76 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
CNTNAP3Q9BZ76 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms