Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RPS3AP54-201ENST00000435535 734 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AP000281.1-201ENST00000444036 316 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AC004980.3-201ENST00000447046 365 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MTCO1P42-201ENST00000457379 726 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RPL7P24-201ENST00000493052 752 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RNA5SP230-201ENST00000517039 122 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL359219.2-201ENST00000555184 348 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MIR4660-201ENST00000583549 74 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MIR4443-201ENST00000585052 53 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AL049767.1-202ENST00000637826 242 ntBASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM55Q9BYV6 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SAGE2P-201ENST00000420011 2126 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 BTBD10P2-201ENST00000404779 676 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SNRPEP6-201ENST00000407465 277 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RN7SKP286-201ENST00000410894 299 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC245060.4-201ENST00000413293 1121 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RPS4XP5-201ENST00000419038 768 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 BX284632.2-201ENST00000421091 399 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL035660.1-201ENST00000422041 222 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MTCO2P5-201ENST00000422621 426 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RPL12P18-201ENST00000437175 325 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SKP1P1-201ENST00000438081 489 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MTATP6P13-201ENST00000438531 667 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL512605.1-202ENST00000441919 381 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MTCO2P3-201ENST00000442543 421 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL359955.2-201ENST00000445380 353 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 Z82190.1-201ENST00000454534 490 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RPS26P39-201ENST00000469206 341 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC104563.1-201ENST00000476147 376 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC023424.2-201ENST00000493479 777 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 RPS17P5-201ENST00000498293 408 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC008629.2-201ENST00000503783 483 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC137627.1-201ENST00000545761 289 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AP005119.2-201ENST00000579735 1105 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 TPMTP1-201ENST00000592307 737 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC091965.4-201ENST00000607691 587 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL139124.1-201ENST00000609123 421 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC109347.2-201ENST00000610220 349 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC026368.1-201ENST00000614934 690 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MIR6826-201ENST00000617808 98 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL139089.1-201ENST00000620372 975 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL160394.1-201ENST00000624765 724 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 KPNA2P2-201ENST00000419546 1489 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AC104964.3-201ENST00000606115 2860 ntBASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM55Q9BYV6 AL353796.1-201ENST00000561542 3241 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms