Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL589765.3-201ENST00000446084 462 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AC011825.1-201ENST00000484967 388 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 Vault.1-201ENST00000516474 102 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AP005205.1-201ENST00000563503 508 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 AL033523.1-201ENST00000605153 153 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 RMST_9.1-201ENST00000619945 193 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 IPO8P1-201ENST00000455509 3109 ntBASIC5.36□□□□□ -1.55
SCAPERQ9BY12 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
SCAPERQ9BY12 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC026523.2-201ENST00000625039 7739 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 GCNT6-201ENST00000379591 934 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 RN7SKP111-201ENST00000410349 271 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AL024507.1-201ENST00000412741 274 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 OR5AW1P-201ENST00000426334 1006 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 TRAV15-201ENST00000556680 249 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AL732618.1-201ENST00000623251 301 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 OR5AC4P-202ENST00000642086 985 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.35□□□□□ -1.55
SCAPERQ9BY12 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.35□□□□□ -1.55
SCAPERQ9BY12 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 SNORA80A-201ENST00000363922 136 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 RN7SKP53-201ENST00000411337 315 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 NDUFB1P1-201ENST00000435191 180 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AC037198.2-201ENST00000478845 733 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AC097462.2-201ENST00000504623 481 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 HNRNPKP5-201ENST00000515300 253 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AC027281.1-201ENST00000574178 758 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AL451007.1-201ENST00000595491 289 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 CKS1BP3-201ENST00000600888 237 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AC124312.4-201ENST00000605533 310 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AL355596.1-201ENST00000565399 3996 ntBASIC5.34□□□□□ -1.55
SCAPERQ9BY12 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCAPERQ9BY12 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 MIR513A2-201ENST00000385249 127 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 VN1R51P-201ENST00000411675 945 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 YWHAEP5-201ENST00000431545 765 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 ELOCP18-201ENST00000434209 337 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 NPM1P39-201ENST00000449818 867 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 AC133473.1-201ENST00000455173 299 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 AC080014.1-201ENST00000496877 1201 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 RNA5SP341-201ENST00000516261 117 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 MIR4672-201ENST00000583126 81 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 LINC00901.1-201ENST00000617252 152 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 AC024341.1-201ENST00000526444 1552 ntBASIC5.33□□□□□ -1.56
SCAPERQ9BY12 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCAPERQ9BY12 ZNF807-201ENST00000328088 1707 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AL357075.1-201ENST00000404107 726 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 RPL27AP5-201ENST00000469428 449 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 SUMO2P20-201ENST00000520803 283 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AP003355.3-201ENST00000623465 114 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC026422.1-201ENST00000623961 452 ntBASIC5.32□□□□□ -1.56
SCAPERQ9BY12 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
SCAPERQ9BY12 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms