Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC007685.1-201ENST00000329806 452 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SSX3Q99909 MIR620-201ENST00000385232 95 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 RPL7P27-201ENST00000403775 720 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 U3.35-201ENST00000408405 208 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 RPL26P29-201ENST00000415623 438 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 RPS17P8-201ENST00000434525 335 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AL451139.1-201ENST00000434718 346 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC005154.2-201ENST00000438110 379 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC016831.4-201ENST00000438302 307 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX3Q99909 RAB11AP1-201ENST00000442978 646 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 TDGF1P1-201ENST00000445734 527 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC073264.2-201ENST00000448886 166 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 NAP1L1P3-201ENST00000462291 880 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 PRDX3P4-201ENST00000470828 747 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 NCOR1P1-202ENST00000486162 291 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 IGLV2-34-201ENST00000490007 283 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC008897.1-201ENST00000494006 347 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 SUMO2P5-201ENST00000506790 245 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 RNU1-6P-201ENST00000516290 144 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 RNU2-58P-201ENST00000516403 183 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 RNU6-709P-201ENST00000517257 104 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.87□□□□□ -1.79
SSX3Q99909 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 AC098935.2-201ENST00000604222 466 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX3Q99909 AF129408.1-201ENST00000608767 431 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 MIR4727-201ENST00000622232 55 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX3Q99909 AL627171.1-201ENST00000618845 1308 ntBASIC3.87□□□□□ -1.79
SSX3Q99909 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SSX3Q99909 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX3Q99909 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
SSX3Q99909 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 MTND5P28-201ENST00000438005 1594 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MTCO1P24-201ENST00000515438 1558 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 CASC19-261ENST00000641853 1638 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX3Q99909 RNVU1-6-201ENST00000364688 164 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 RNU6-1151P-201ENST00000384684 107 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MCTS2P-201ENST00000394552 546 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 RPS4XP9-201ENST00000405151 780 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 ZNF603P-201ENST00000405613 487 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AL080315.1-201ENST00000406055 466 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 P2RY10P2-201ENST00000416730 913 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC245028.1-201ENST00000423259 256 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC005517.2-201ENST00000424673 553 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AL138878.2-201ENST00000440581 1241 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC087879.1-201ENST00000474343 374 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 AC092451.1-201ENST00000480211 153 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 RPL23AP72-201ENST00000492447 435 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX3Q99909 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC091860.1-201ENST00000505723 432 ntBASIC3.86□□□□□ -1.79
SSX3Q99909 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SSX3Q99909 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms