Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNA5SP399-201ENST00000364003 117 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 RNU6-1279P-201ENST00000383917 103 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 RNU6-185P-201ENST00000384421 107 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 RPL31P52-201ENST00000407532 367 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC105402.1-201ENST00000413336 545 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 KCTD10P1-201ENST00000434203 625 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 RPS26P40-201ENST00000435209 294 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC009263.1-201ENST00000441193 1239 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 RANP8-201ENST00000444720 713 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 EXTL2P1-201ENST00000446218 416 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 MTCO3P16-201ENST00000454456 754 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 RNU6-760P-201ENST00000516078 97 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 CBX3P5-201ENST00000552017 521 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 MIR92B-201ENST00000607575 96 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 RNA5SP196-201ENST00000625967 102 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.67□□□□□ -1.82
COL21A1Q96P44 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL21A1Q96P44 AP002001.2-201ENST00000529025 1469 ntBASIC3.67□□□□□ -1.82
COL21A1Q96P44 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 MIR372-201ENST00000362225 67 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 ATP5F1P4-201ENST00000397288 746 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL160175.1-201ENST00000428124 247 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 DNAJC19P1-201ENST00000455312 319 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC068305.1-201ENST00000497406 726 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 HMGB1P3-201ENST00000502802 616 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC108064.1-201ENST00000513791 460 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 RNA5SP179-201ENST00000517284 121 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC023158.1-201ENST00000561632 1025 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AGGF1P8-201ENST00000562979 1000 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL133247.2-201ENST00000603236 482 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC017076.1-201ENST00000607613 578 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AC068724.3-201ENST00000625906 87 ntBASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.66□□□□□ -1.82
COL21A1Q96P44 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL21A1Q96P44 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.82
COL21A1Q96P44 AL139811.1-201ENST00000424779 2299 ntBASIC3.65□□□□□ -1.82
COL21A1Q96P44 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
COL21A1Q96P44 RNU1-85P-201ENST00000364127 164 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 RNA5SP283-201ENST00000365604 119 ntBASIC3.65□□□□□ -1.83
COL21A1Q96P44 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
COL21A1Q96P44 SEC63P1-201ENST00000425785 1258 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms