Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC083899.3-201ENST00000603413 594 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 AC069304.2-201ENST00000605154 435 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 RNU6-88P-201ENST00000606801 100 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 AL031775.1-201ENST00000607014 887 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 MIR6730-201ENST00000622213 67 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 AC079228.1-201ENST00000624774 1049 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 BTBD10P1-201ENST00000549824 1352 ntBASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTHRC1Q96CG8 AC092104.1-201ENST00000497346 1441 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC026523.2-201ENST00000625039 7739 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RPL21P132-201ENST00000331267 462 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RNU4-21P-201ENST00000362802 126 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RNU6-251P-201ENST00000363235 104 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RNU4-75P-201ENST00000364621 146 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP88-201ENST00000365560 109 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 MIR92A2-201ENST00000385299 75 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 FABP12P1-201ENST00000401911 322 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 MTCO3P31-201ENST00000405526 789 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RN7SKP125-201ENST00000410481 302 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 Y_RNA.619-201ENST00000410951 90 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC013429.2-201ENST00000418798 781 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC009965.2-201ENST00000425328 970 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 NPM1P24-201ENST00000428039 894 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 VN1R54P-201ENST00000435210 1049 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 NPM1P39-201ENST00000449818 867 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 SBDSP1-204ENST00000453858 737 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL356981.1-201ENST00000454879 684 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RPL18AP17-201ENST00000455326 198 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC108078.3-201ENST00000502633 489 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL117351.2-201ENST00000513571 157 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC110775.1-201ENST00000513721 462 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RNU6-202P-201ENST00000515998 96 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC008802.1-201ENST00000519121 791 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AGGF1P4-201ENST00000568249 801 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC074051.3-201ENST00000570238 358 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 TVP23CP2-201ENST00000571473 623 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 MIR4646-201ENST00000580775 63 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC020914.6-201ENST00000594327 272 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC087783.2-201ENST00000605070 562 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC087752.4-201ENST00000605911 462 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC024560.3-201ENST00000608482 349 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL391497.1-201ENST00000608671 547 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AL049794.2-201ENST00000616301 365 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC090510.2-201ENST00000617465 629 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC092184.1-201ENST00000625042 715 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 AC092192.1-201ENST00000633154 1018 ntBASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTHRC1Q96CG8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms