Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 AC002525.1-201ENST00000624392 1622 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 SNORD50.2-201ENST00000365465 70 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 RNY3P13-201ENST00000365542 102 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HPS1Q92902 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HPS1Q92902 AL359643.1-201ENST00000404109 423 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AL590290.1-201ENST00000405336 380 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 GSTA10P-201ENST00000412182 576 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS1Q92902 RPSAP1-201ENST00000421328 880 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 MYL8P-204ENST00000431574 518 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 TIMM9P1-201ENST00000436122 256 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 RPL23AP43-201ENST00000446445 471 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 FCF1P4-201ENST00000448326 183 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS1Q92902 HMGB3P21-201ENST00000452483 547 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS1Q92902 AC011225.1-201ENST00000457751 369 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 SNORD5.1-201ENST00000458800 75 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 RPL23P10-201ENST00000468780 412 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 AL161747.1-201ENST00000480068 358 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 RN7SL335P-201ENST00000482790 304 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 EIF3KP3-201ENST00000514461 639 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 SNORA40.15-201ENST00000516884 107 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS1Q92902 TRIM77BP-201ENST00000524985 1119 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.41□□□□□ -1.38
HPS1Q92902 RPA2P1-201ENST00000556557 721 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.41□□□□□ -1.38
HPS1Q92902 AL132640.2-202ENST00000559732 614 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC015720.2-201ENST00000567709 334 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 MIR5188-201ENST00000583467 113 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 AC016629.2-201ENST00000597341 199 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 AC012510.1-201ENST00000607946 759 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 pRNA.9-201ENST00000618609 89 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 MIR4272-201ENST00000635924 64 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 NAMPTP1-201ENST00000440465 2514 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC6.41□□□□□ -1.38
HPS1Q92902 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HPS1Q92902 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HPS1Q92902 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 DLD-204ENST00000437604 1859 ntTSL 2 BASIC6.41□□□□□ -1.38
HPS1Q92902 PARP4P1-201ENST00000435945 2337 ntBASIC6.41□□□□□ -1.38
HPS1Q92902 HSPA8P18-201ENST00000439846 1928 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HPS1Q92902 AP003471.1-202ENST00000319051 1988 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.4□□□□□ -1.38
HPS1Q92902 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.4□□□□□ -1.38
HPS1Q92902 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 AL136531.3-201ENST00000624378 3658 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.4□□□□□ -1.38
HPS1Q92902 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HPS1Q92902 OR5M2P-202ENST00000641241 4242 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.4□□□□□ -1.38
HPS1Q92902 Y_RNA.122-201ENST00000363331 96 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 Y_RNA.126-201ENST00000363382 111 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 RNA5SP333-201ENST00000363466 118 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 RNA5SP334-201ENST00000364825 118 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 RNU6-641P-201ENST00000384006 107 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 MIR320B1-201ENST00000390209 79 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HPS1Q92902 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HPS1Q92902 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HPS1Q92902 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HPS1Q92902 AL356421.1-201ENST00000403255 413 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 AC011933.1-201ENST00000413334 321 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 Z99755.1-201ENST00000414048 380 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 NME1P1-201ENST00000420914 382 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 RPL12P34-201ENST00000424532 479 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 C4BPAP2-201ENST00000428434 478 ntBASIC6.4□□□□□ -1.38
HPS1Q92902 AC114495.1-201ENST00000441274 436 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms