Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OR6C64P-201ENST00000419708 825 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC048351.1-201ENST00000420064 602 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL355433.1-201ENST00000422804 300 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 MTCO3P30-201ENST00000426425 670 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RPL31P54-201ENST00000429803 370 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RPS25P9-201ENST00000435591 252 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 MTCYBP39-201ENST00000437562 491 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 PRPF38AP2-201ENST00000438179 851 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC104651.2-201ENST00000447549 528 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 SETP14-201ENST00000497538 873 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC091868.1-201ENST00000508746 304 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RNU6-885P-201ENST00000516607 104 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 RN7SKP66-201ENST00000516681 231 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 Y_RNA.695-201ENST00000516715 107 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC106038.2-201ENST00000520706 568 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 SMARCE1P4-201ENST00000523647 241 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AP001189.2-201ENST00000527320 189 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC004217.3-201ENST00000551552 878 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 MIR5699-201ENST00000578903 90 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AP001094.1-201ENST00000579805 193 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC209154.1-201ENST00000582156 337 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 VN1R84P-201ENST00000593697 235 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC080078.2-201ENST00000603766 501 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 MIR6826-201ENST00000617808 98 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL359715.5-201ENST00000623431 443 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC092656.1-203ENST00000624134 423 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 PCMTD1P7-201ENST00000634506 357 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC127502.3-201ENST00000636170 1206 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AC090582.1-201ENST00000636321 199 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 AL590763.1-201ENST00000398297 1545 ntBASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG4AQ8WYN0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC092104.1-201ENST00000497346 1441 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL136164.3-201ENST00000624429 3978 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL672167.1-206ENST00000356293 943 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 RNU6-1066P-201ENST00000363573 105 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 SNORA4.1-201ENST00000364263 144 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 RNU4-75P-201ENST00000364621 146 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL590762.2-201ENST00000395798 571 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL139098.1-201ENST00000407291 389 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 Y_RNA.599-201ENST00000410489 109 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 CHEK2P3-201ENST00000416118 248 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 Z74021.1-201ENST00000423610 407 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 SKP1P3-201ENST00000429280 487 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 OR2B7P-201ENST00000429302 934 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 RPL7P59-201ENST00000447700 943 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 MTCO3P11-201ENST00000455103 774 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 snoU13.20-201ENST00000459180 104 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC068724.1-201ENST00000487100 792 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC104685.1-201ENST00000502445 371 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC010285.3-201ENST00000511668 676 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL117351.2-201ENST00000513571 157 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AC133555.2-201ENST00000550213 292 ntBASIC4.89□□□□□ -1.63
ATG4AQ8WYN0 AL391156.1-201ENST00000554965 554 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms