Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 IPO8P1-201ENST00000455509 3109 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC008033.1-201ENST00000216407 1162 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 OR5P1P-201ENST00000299512 925 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SNORA51.1-201ENST00000363243 140 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SNORD56.4-201ENST00000363883 71 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SNORA37-201ENST00000384504 129 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC069282.1-201ENST00000411911 526 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 BX664727.1-201ENST00000416024 466 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC079355.1-201ENST00000421770 223 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC115285.1-201ENST00000424879 736 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 VDAC1P6-201ENST00000430062 855 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC105402.2-201ENST00000438503 358 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 HMGN1P5-201ENST00000448591 263 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 DNAJC19P8-201ENST00000452887 259 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 RPS20P32-201ENST00000456044 356 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SNRPGP3-201ENST00000469405 227 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SETP6-201ENST00000479329 568 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC073522.1-201ENST00000483312 377 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 RPL31P61-201ENST00000496160 376 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LECT2-205ENST00000522943 574 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AP000676.2-201ENST00000529711 301 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC104072.1-201ENST00000568817 668 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 DNAJC19P3-201ENST00000594491 331 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AL354984.3-201ENST00000604803 325 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 OR2BH1P-201ENST00000608850 864 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AP005229.2-201ENST00000609980 697 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 MIR6826-201ENST00000617808 98 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 MIR6729-201ENST00000618194 65 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC016717.3-201ENST00000624730 554 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC140479.6-201ENST00000633535 357 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 AC132825.7-201ENST00000638744 335 ntBASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC119744.1-201ENST00000454746 1715 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RNU1-130P-201ENST00000363930 160 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 SNORD113.2-201ENST00000364166 89 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC092745.2-202ENST00000411880 369 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 P2RY10P2-201ENST00000416730 913 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RPL7AP25-201ENST00000423357 805 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 ACTR3P2-201ENST00000439585 1257 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC092809.1-201ENST00000441469 474 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RPL6P5-201ENST00000445678 828 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RPL21P103-201ENST00000479921 488 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RPL21P47-201ENST00000483696 477 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RN7SL271P-201ENST00000487601 295 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 MIR2114-201ENST00000516645 80 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 OR4A2P-201ENST00000527276 913 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 MTND5P21-201ENST00000531961 522 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AP004242.1-201ENST00000533701 349 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AC027104.1-201ENST00000563702 681 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 MIR3934-201ENST00000579806 107 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 RN7SL622P-201ENST00000585292 275 ntBASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC71LQ8N9Z2 NTAN1P1-201ENST00000603150 646 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms