Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC115085.1-201ENST00000588924 229 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC006116.5-201ENST00000591936 559 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC010608.2-201ENST00000624830 470 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 OR6C71P-202ENST00000641886 1107 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 SNORD115-48-201ENST00000364764 76 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC016769.2-201ENST00000414815 475 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 MTND4P24-201ENST00000424002 397 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 MTND4LP7-201ENST00000431728 294 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 ZNF965P-201ENST00000432501 817 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 BMS1P19-201ENST00000433925 393 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 RSL24D1P8-201ENST00000434442 492 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 MTND5P8-201ENST00000449817 1083 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 TPMTP4-201ENST00000450749 678 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 TPRKBP1-201ENST00000456243 481 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC011276.1-201ENST00000469688 323 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AL132838.2-201ENST00000492041 314 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC025674.1-201ENST00000507074 324 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC087369.1-201ENST00000520775 996 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC004923.2-201ENST00000529649 369 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 MIR4330-201ENST00000579077 105 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 NF1P5-201ENST00000588287 448 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC234771.5-201ENST00000600161 514 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AL137849.1-201ENST00000604767 169 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AL034351.1-201ENST00000605288 668 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC006946.3-201ENST00000609791 756 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 BX323046.1-201ENST00000610145 535 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC025016.1-201ENST00000616746 682 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 CR392039.4-201ENST00000624968 501 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AL353746.1-201ENST00000566293 6881 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 AC139713.2-214ENST00000642059 1811 ntBASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUDCD3Q8IVD9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 MTCO3P4-201ENST00000419236 787 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AC009480.2-201ENST00000422916 432 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RPL23AP38-201ENST00000423801 469 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AC115285.1-201ENST00000424879 736 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 SBDSP1-204ENST00000453858 737 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RPL9P32-201ENST00000464118 620 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RPS27AP13-201ENST00000498403 237 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CDH12P4-201ENST00000517835 295 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CDH12P3-201ENST00000517935 295 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CDH12P1-201ENST00000518435 295 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AP002812.4-201ENST00000532139 286 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CR383656.6-201ENST00000550518 394 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AL121594.4-201ENST00000556211 1196 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AC106785.3-201ENST00000564064 847 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AC104785.1-201ENST00000603220 588 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 MIR6820-201ENST00000611508 62 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AP000346.3-201ENST00000622821 210 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 MIR3653-201ENST00000625572 110 ntBASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NUDCD3Q8IVD9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms