Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC128687.2-201ENST00000609657 566 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 OR51C1P-202ENST00000641159 1444 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 RN7SKP111-201ENST00000410349 271 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AL035458.1-201ENST00000433096 585 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 ATP5HP2-201ENST00000433885 485 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 OR2A20P-203ENST00000498397 1268 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 MOB1AP1-201ENST00000430903 535 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AL135938.1-201ENST00000443141 297 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AP006245.1-201ENST00000522549 120 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 LARP7P3-201ENST00000579888 337 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.38□□□□□ -2.03
CSMD3Q7Z407 AC026979.4-201ENST00000606555 645 ntBASIC2.38□□□□□ -2.03
CSMD3Q7Z407 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 OR5AW1P-201ENST00000426334 1006 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 HMGB1P5-202ENST00000451497 985 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AL157394.1-201ENST00000562983 1224 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC097504.1-201ENST00000515103 2415 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 SRP72P2-201ENST00000344851 1979 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AL024507.1-201ENST00000412741 274 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 REREP1Y-201ENST00000422655 198 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 NPM1P48-201ENST00000436002 853 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 REREP2Y-201ENST00000439103 200 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 MIR2682-201ENST00000580305 110 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC068020.1-201ENST00000594215 661 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 RPL23AP92-201ENST00000603609 255 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC139713.2-210ENST00000641741 992 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 OR5AC4P-202ENST00000642086 985 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 HSPA8P19-201ENST00000505359 1517 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 RPL21P112-201ENST00000434403 463 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 RPS20P1-201ENST00000434853 354 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 SETP5-201ENST00000437270 562 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC006028.1-201ENST00000438379 402 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AL031584.1-201ENST00000447169 754 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC098824.1-201ENST00000453565 980 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms