Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS13CQ709C8 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 VN1R78P-201ENST00000597393 564 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 MIR7154-201ENST00000620673 73 ntBASIC2.75□□□□□ -1.97
VPS13CQ709C8 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS13CQ709C8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 U3.19-201ENST00000390893 196 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 AL357075.1-201ENST00000404107 726 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 AL672296.1-201ENST00000427780 2158 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 NPM1P37-201ENST00000403105 874 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 snoU109.6-201ENST00000516831 118 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS13CQ709C8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 CYP4A43P-201ENST00000568156 121 ntBASIC2.74□□□□□ -1.97
VPS13CQ709C8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS13CQ709C8 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 LARP7P3-201ENST00000579888 337 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC009313.2-201ENST00000417893 1941 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 BMS1P21-201ENST00000634565 365 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AL079305.1-201ENST00000623159 3008 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 AL357552.1-201ENST00000445254 415 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS13CQ709C8 SETP12-201ENST00000514068 805 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 BRDTP1-201ENST00000605735 677 ntBASIC2.73□□□□□ -1.97
VPS13CQ709C8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 MAPK10-286ENST00000641208 8747 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS13CQ709C8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 RNU1-18P-201ENST00000363062 164 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 RPS24P12-201ENST00000402084 394 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 RPL7AP73-201ENST00000413490 353 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC128713.1-201ENST00000471495 306 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 MORF4L2P1-201ENST00000503761 858 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 AP001207.2-201ENST00000519490 539 ntBASIC2.72□□□□□ -1.97
VPS13CQ709C8 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS13CQ709C8 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms