Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AC084757.1-201ENST00000559987 490 ntBASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AC093510.2-201ENST00000562820 896 ntBASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AL161637.1-201ENST00000622380 412 ntBASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 AL592437.2-201ENST00000421655 2434 ntBASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 OR11H5P-202ENST00000641612 1325 ntBASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RFWD3Q6PCD5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC122718.1-201ENST00000439448 744 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 RPL23AP23-201ENST00000452590 471 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 MTND2P39-201ENST00000457230 764 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 FAM133DP-201ENST00000464802 691 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC108120.2-201ENST00000512973 294 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC113192.3-201ENST00000529152 742 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 NPM1P35-201ENST00000533043 868 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC106785.3-201ENST00000564064 847 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 CBX3P2-202ENST00000583365 535 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC010200.2-201ENST00000605098 235 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC092953.2-201ENST00000608000 699 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 MIR486-1-201ENST00000612171 68 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 AC006213.4-201ENST00000616184 634 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 ZNF90P1-201ENST00000480493 1951 ntBASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RFWD3Q6PCD5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 HMGB3P19-201ENST00000403971 560 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 PPIAP17-201ENST00000438507 471 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC104629.1-201ENST00000494226 508 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 RPL31P61-201ENST00000496160 376 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 MTND3P3-201ENST00000505004 126 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC018797.3-201ENST00000513388 1241 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 HMGN1P15-201ENST00000513870 295 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 RNA5SP179-201ENST00000517284 121 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC135001.1-201ENST00000544546 283 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AL592436.1-201ENST00000605135 558 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC120053.1-201ENST00000607706 736 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 CDRT1-208ENST00000630868 794 ntBASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RFWD3Q6PCD5 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms